Rpl31-ps13 Pseudogene Detail

Summary

• Symbol
  Rpl31-ps13
• Name
  ribosomal protein L31, pseudogene 13
• Synonyms
  Gm9858

• Feature Type
  pseudogene
• IDs
  MGI:3809036
  NCBI Gene: 100504277
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:100552073-100552450 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 53.18 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  63 from dbSNP Build 142
• Strain Annotations
  20

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3809036	pseudogene	Chr13:100551999-100552487 (+)
129S1/SvImJ	ENSMUSG00200009019	pseudogene	Chr13:95047894-95048271 (+)
A/J	ENSMUSG00195030150	pseudogene	Chr13:95595364-95595741 (+)
AKR/J	ENSMUSG00220028266	pseudogene	Chr13:94017374-94017751 (+)
BALB/cJ	ENSMUSG00180039529	pseudogene	Chr13:96134485-96134862 (+)
C3H/HeJ	ENSMUSG00175017203	pseudogene	Chr13:96233007-96233384 (+)
C57BL/6NJ	ENSMUSG00215035769	pseudogene	Chr13:96204389-96204766 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011621	pseudogene	Chr13:95369186-95369567 (+)
CBA/J	ENSMUSG00210012030	pseudogene	Chr13:95556156-95556533 (+)
DBA/2J	ENSMUSG00185020042	pseudogene	Chr13:99300152-99300529 (+)
FVB/NJ	ENSMUSG00205035439	pseudogene	Chr13:94928277-94928654 (+)
JF1/MsJ	ENSUMUG00000030139	pseudogene	Chr13:98931031-98931408 (+)
LP/J	ENSMUSG00230038294	pseudogene	Chr13:109461146-109461523 (+)
NOD/ShiLtJ	ENSMUSG00190045649	pseudogene	Chr13:95822001-95822378 (+)
NOD/ShiLtJ	ENSMUSG00190049286	pseudogene	Chr5:129904731-129905105 (+)
NOD/ShiLtJ	ENSMUSG00190044631	pseudogene	Chr13:95888315-95888692 (+)
NZO/HlLtJ	ENSMUSG00225037535	pseudogene	Chr13:101814740-101815117 (+)
PWK/PhJ	ENSLUMG00010025625	pseudogene	Chr13:94959135-94959512 (+)
SPRET/EiJ	ENSMSPG00010009254	pseudogene	Chr13:96305564-96305941 (+)
WSB/EiJ	ENSIUOG00005035402	pseudogene	Chr13:94970241-94970618 (+)

Homology

• Gene Tree
  Rpl31-ps13
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000051723 (Evidence)
• NCBI Gene
  100504277

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000051723	Ensembl Gene Model | MGI Sequence Detail	378	C57BL/6J
transcript	ENSMUST00000060994	Ensembl | MGI Sequence Detail	378	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;