Tgif2-ps2 Pseudogene Detail

Summary

• Symbol
  Tgif2-ps2
• Name
  TGFB-induced factor homeobox 2, pseudogene 2
• Synonyms
  Gm7148

• Feature Type
  pseudogene
• IDs
  MGI:3805950
  NCBI Gene: 634967
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:40426249-40426959 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 19.42 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3805950	pseudogene	Chr17:40426109-40428947 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011944	pseudogene	Chr2:161782035-161791479 (+)
A/J	MGP_AJ_G0011940	pseudogene	Chr2:155331039-155340495 (+)
AKR/J	MGP_AKRJ_G0011905	pseudogene	Chr2:159848801-159864404 (+)
BALB/cJ	MGP_BALBcJ_G0011916	pseudogene	Chr2:155620209-155629667 (+)
C3H/HeJ	MGP_C3HHeJ_G0011797	pseudogene	Chr2:160188396-160202687 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011630	pseudogene	Chr17:42638874-42639605 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010682	pseudogene	Chr2:148790758-148799512 (+)
CAST/EiJ	MGP_CASTEiJ_G0011583	pseudogene	Chr2:160530045-160539468 (+)
CBA/J	MGP_CBAJ_G0011771	pseudogene	Chr2:172570281-172582033 (+)
DBA/2J	MGP_DBA2J_G0011823	pseudogene	Chr2:154501496-154513128 (+)
FVB/NJ	MGP_FVBNJ_G0011830	pseudogene	Chr2:152871051-152885916 (+)
LP/J	MGP_LPJ_G0011891	pseudogene	Chr2:161892352-161901791 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011830	pseudogene	Chr2:176451215-176463213 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012217	pseudogene	Chr2:159706492-159715961 (+)
PWK/PhJ	MGP_PWKPhJ_G0011432	pseudogene	Chr2:154009456-154019363 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011248	pseudogene	Chr2:158649771-158659199 (+)
WSB/EiJ	MGP_WSBEiJ_G0011603	pseudogene	Chr2:160598399-160607850 (+)

Homology

• Gene Tree
  Tgif2-ps2
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000045842 (Evidence)
• NCBI Gene
  634967

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000045842	Ensembl Gene Model | MGI Sequence Detail	711	C57BL/6J
transcript	ENSMUST00000061746	Ensembl | MGI Sequence Detail	711	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;