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Gm16062 Gene Detail
Summary
  • Symbol
    Gm16062
  • Name
    predicted gene 16062
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3802162
    NCBI Gene: 100504104
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:59700906-59709188 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 37.80 cM
Strain
Comparison
more
  • SNPs within 2kb
    77 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3802162
 lncRNA gene Chr11:59700895-59709317 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002974
 antisense lncRNA gene Chr11:59660337-59668716 (+)
A/J MGP_AJ_G0002951
 antisense lncRNA gene Chr11:57386639-57395158 (+)
AKR/J MGP_AKRJ_G0002932
 antisense lncRNA gene Chr11:59308721-59317221 (+)
BALB/cJ MGP_BALBcJ_G0002938
 antisense lncRNA gene Chr11:57734550-57742951 (+)
C3H/HeJ MGP_C3HHeJ_G0002894
 antisense lncRNA gene Chr11:59174910-59183411 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003080
 antisense lncRNA gene Chr11:61553763-61562174 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002621
 antisense lncRNA gene Chr11:54631752-54640483 (+)
CAST/EiJ MGP_CASTEiJ_G0002865
 antisense lncRNA gene Chr11:59317170-59325616 (+)
CBA/J MGP_CBAJ_G0002891
 antisense lncRNA gene Chr11:64248161-64256684 (+)
DBA/2J MGP_DBA2J_G0002898
 antisense lncRNA gene Chr11:57049963-57058378 (+)
FVB/NJ MGP_FVBNJ_G0002916
 antisense lncRNA gene Chr11:56708032-56716441 (+)
LP/J MGP_LPJ_G0002973
 antisense lncRNA gene Chr11:60259615-60267870 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002904
 antisense lncRNA gene Chr11:65339611-65347992 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003084
 antisense lncRNA gene Chr11:59333239-59342092 (+)
PWK/PhJ MGP_PWKPhJ_G0002823
 antisense lncRNA gene Chr11:57646969-57656057 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002770
 antisense lncRNA gene Chr11:59127125-59135824 (+)
WSB/EiJ MGP_WSBEiJ_G0002894
 antisense lncRNA gene Chr11:59011573-59019950 (+)



Homology
less
Human Diseases
less
  • References
    3 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    17 phenotype references
  • All Mutations and Alleles
    128
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Gene trapped
    123
  • Targeted
    3
  • Genomic Mutations
    4 involving Gm16062
  • Find Mice (IMSR)
    96 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    10
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100504104 NCBI Gene Model | MGI Sequence Detail 8283 C57BL/6J ±  kb
transcript NR_045686 RefSeq | MGI Sequence Detail 642 C57BL/6  
polypeptide Q3UMG8 UniProt | EBI | MGI Sequence Detail 118 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 1
References
more
  • Summaries
    All 28
    Diseases 3
    Phenotypes 17
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:185284 Lacaria M, et al., Enriched rearing improves behavioral responses of an animal model for CNV-based autistic-like traits. Hum Mol Genet. 2012 Jul 15;21(14):3083-96
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory