Gm16120 Gene Detail

Summary

• Symbol
  Gm16120
• Name
  predicted gene 16120

• Feature Type
  lncRNA gene
• IDs
  MGI:3802132
  NCBI Gene: 105242545
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:140193118-140196525 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 78.89 cM

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802132	lncRNA gene	Chr5:140193118-140196525 (+)
129S1/SvImJ	ENSMUSG00200042530	lncRNA gene	Chr5:134059018-134062384 (+)
A/J	ENSMUSG00195046779	lncRNA gene	Chr5:133682942-133686308 (+)
AKR/J	ENSMUSG00220023875	lncRNA gene	Chr5:132945093-132948460 (+)
BALB/cJ	ENSMUSG00180035715	lncRNA gene	Chr5:133783196-133786564 (+)
C3H/HeJ	ENSMUSG00175048803	lncRNA gene	Chr5:135704211-135707577 (+)
C57BL/6NJ	ENSMUSG00215040747	lncRNA gene	Chr5:133637424-133640791 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003800	antisense lncRNA gene	Chr5:132926084-132929471 (+)
CAST/EiJ	ENSTCUG00005036906	lncRNA gene	Chr5:133107344-133110751 (+)
CBA/J	ENSMUSG00210024237	lncRNA gene	Chr5:134521283-134524650 (+)
DBA/2J	ENSMUSG00185054821	lncRNA gene	Chr5:137536797-137540163 (+)
FVB/NJ	ENSMUSG00205041397	lncRNA gene	Chr5:133340622-133343988 (+)
JF1/MsJ	ENSUMUG00000054266	lncRNA gene	Chr5:140425783-140429159 (+)
LP/J	ENSMUSG00230031338	lncRNA gene	Chr5:141653042-141656408 (+)
NOD/ShiLtJ	ENSMUSG00190045280	lncRNA gene	Chr5:133478867-133482233 (+)
NZO/HlLtJ	ENSMUSG00225024008	lncRNA gene	Chr5:149124617-149127983 (+)
PWK/PhJ	ENSLUMG00010020735	lncRNA gene	Chr5:132149419-132152797 (+)
SPRET/EiJ	ENSMSPG00010040841	lncRNA gene	Chr5:135743380-135746753 (+)
WSB/EiJ	ENSIUOG00005041211	lncRNA gene	Chr5:136019613-136023018 (+)

Homology

• Gene Tree
  Gm16120
  

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000087248 (Evidence)
• NCBI Gene
  105242545

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087248	Ensembl Gene Model | MGI Sequence Detail	3408	C57BL/6J
transcript	ENSMUST00000127990	Ensembl | MGI Sequence Detail	849	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm16120:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr49537	Chr5:140194586-140194605 (+)	1,478 bp