Mup-ps13 Pseudogene Detail

Summary

• Symbol
  Mup-ps13
• Name
  major urinary protein, pseudogene 13
• Synonyms
  EG621093, Gm16003, OTTMUSG00000007473

• Feature Type
  pseudogene
• IDs
  MGI:3802118
  NCBI Gene: 621093
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:61452467-61455210 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 32.88 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  65 from dbSNP Build 142
• Strain Annotations
  9

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802118	pseudogene	Chr4:61452467-61455210 (+)
129S1/SvImJ	ENSMUSG00200004851	pseudogene	Chr4:56106898-56107849 (+)
A/J	ENSMUSG00195008514	pseudogene	Chr4:57291744-57294028 (+)
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008574	pseudogene	Chr4:56420002-56422719 (+)
CBA/J	no annotation
DBA/2J	ENSMUSG00185019882	pseudogene	Chr4:57063479-57066230 (+)
FVB/NJ	ENSMUSG00205018136	pseudogene	Chr4:55594751-55597455 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230005277	pseudogene	Chr4:60600602-60603353 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225013802	pseudogene	Chr4:65626942-65629693 (+)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010036603	pseudogene	Chr4:56616050-56618798 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Mup-ps13
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Mup-ps13
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  12
• RefSeq
  1

• Ensembl
  ENSMUSG00000095532 (Evidence)
• NCBI Gene
  621093

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000095532	Ensembl Gene Model | MGI Sequence Detail	2744	C57BL/6J
transcript	ENSMUST00000120662	Ensembl | MGI Sequence Detail	545	Not Applicable

Other
Accession IDs

MGI:3648065, MGI:3712365

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:334686 Yang H, et al., Mup-knockout mice generated through CRISPR/Cas9-mediated deletion for use in urinary protein analysis. Acta Biochim Biophys Sin (Shanghai). 2016 May;48(5):468-73
• Latest
  J:334590 Greve S, et al., The major urinary protein gene cluster knockout mouse as a novel model for translational metabolism research. Sci Rep. 2022 Aug 1;12(1):13161