Gm15943 Gene Detail

Summary

• Symbol
  Gm15943
• Name
  predicted gene 15943

• Feature Type
  lncRNA gene
• IDs
  MGI:3802102
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:58029737-58187449 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 24.48 cM

Strain
Comparison

• SNPs within 2kb
  4682 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802102	lncRNA gene	Chr15:58029737-58187449 (+)
129S1/SvImJ	ENSMUSG00200031917	lncRNA gene	Chr15:55060443-55170021 (+)
A/J	ENSMUSG00195006548	lncRNA gene	Chr15:55124602-55234193 (+)
AKR/J	ENSMUSG00220021771	lncRNA gene	Chr15:55098766-55208373 (+)
BALB/cJ	ENSMUSG00180009167	lncRNA gene	Chr15:55047871-55157623 (+)
C3H/HeJ	ENSMUSG00175005299	lncRNA gene	Chr15:55300593-55410188 (+)
C57BL/6NJ	ENSMUSG00215017360	lncRNA gene	Chr15:55041933-55151518 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013428	unclassified non-coding RNA gene	Chr15:52233552-52342170 (+)
CAST/EiJ	ENSTCUG00005006945	lncRNA gene	Chr15:54945998-55055628 (+)
CBA/J	ENSMUSG00210007240	lncRNA gene	Chr15:55124349-55233921 (+)
DBA/2J	ENSMUSG00185026814	lncRNA gene	Chr15:55100209-55209788 (+)
FVB/NJ	ENSMUSG00205006691	lncRNA gene	Chr15:54929243-55038825 (+)
JF1/MsJ	ENSUMUG00000030612	lncRNA gene	Chr15:54908265-55016181 (+)
LP/J	ENSMUSG00230008291	lncRNA gene	Chr15:58403990-58513561 (+)
NOD/ShiLtJ	ENSMUSG00190018516	lncRNA gene	Chr15:55108563-55218279 (+)
NZO/HlLtJ	ENSMUSG00225028662	lncRNA gene	Chr15:58734947-58844519 (+)
PWK/PhJ	ENSLUMG00010028342	lncRNA gene	Chr15:55189610-55297497 (+)
SPRET/EiJ	ENSMSPG00010025032	lncRNA gene	Chr15:56370735-56482208 (+)
WSB/EiJ	ENSIUOG00005006585	lncRNA gene	Chr15:55147383-55257372 (+)

Homology

• Gene Tree
  Gm15943
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  23 phenotype references
  

• All Mutations and Alleles
  6
• Chemically induced (other)
  3
• Gene trapped
  2
• Radiation induced
  1
• Genomic Mutations
  4 involving Gm15943
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  65

• Ensembl
  ENSMUSG00000086801 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086801	Ensembl Gene Model | MGI Sequence Detail	157713	C57BL/6J
transcript	ENSMUST00000147638	Ensembl | MGI Sequence Detail	3821	Not Applicable

References

• Summaries
  All 27

  Phenotypes 23
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)