Gm16046 Gene Detail

Summary

• Symbol
  Gm16046
• Name
  predicted gene 16046

• Feature Type
  lncRNA gene
• IDs
  MGI:3802093
  NCBI Gene: 105246217
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:13895924-13903832 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 8.95 cM

Strain
Comparison

• SNPs within 2kb
  291 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802093	lncRNA gene	Chr17:13895924-13903832 (-)
129S1/SvImJ	ENSMUSG00200035124	lncRNA gene	Chr17:9758550-9766033 (-)
A/J	ENSMUSG00195039161	lncRNA gene	Chr17:10551522-10559011 (-)
AKR/J	ENSMUSG00220030494	lncRNA gene	Chr17:10176813-10184301 (-)
BALB/cJ	ENSMUSG00180027867	lncRNA gene	Chr17:9601845-9609335 (-)
C3H/HeJ	ENSMUSG00175036880	lncRNA gene	Chr17:9689530-9697047 (-)
C57BL/6NJ	ENSMUSG00215030198	lncRNA gene	Chr17:9835032-9842894 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013471	unclassified non-coding RNA gene	Chr17:9340576-9348581 (-)
CAST/EiJ	ENSTCUG00005023596	lncRNA gene	Chr17:10189598-10197506 (-)
CBA/J	ENSMUSG00210040381	lncRNA gene	Chr17:9450162-9457679 (-)
DBA/2J	ENSMUSG00185040211	lncRNA gene	Chr17:11098584-11106074 (-)
FVB/NJ	ENSMUSG00205010248	lncRNA gene	Chr17:9951577-9959380 (-)
JF1/MsJ	ENSUMUG00000040587	lncRNA gene	Chr17:10841672-10849700 (-)
LP/J	ENSMUSG00230027424	lncRNA gene	Chr17:12527639-12535123 (-)
NOD/ShiLtJ	ENSMUSG00190037901	lncRNA gene	Chr17:9898788-9906298 (-)
NZO/HlLtJ	ENSMUSG00225049017	lncRNA gene	Chr17:14449850-14457332 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010042487	lncRNA gene	Chr17:10418583-10426726 (-)
WSB/EiJ	ENSIUOG00005042633	lncRNA gene	Chr17:10300467-10307986 (+)

Homology

• Gene Tree
  Gm16046
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000085705 (Evidence)
• NCBI Gene
  105246217

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085705	Ensembl Gene Model | MGI Sequence Detail	7909	C57BL/6J
transcript	ENSMUST00000150889	Ensembl | MGI Sequence Detail	1217	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm16046:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr146482	Chr17:13903747-13903785 (-)	66 bp