Gm15903 Gene Detail

Summary

• Symbol
  Gm15903
• Name
  predicted gene 15903

• Feature Type
  lncRNA gene
• IDs
  MGI:3802037
  NCBI Gene: 100504254
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:129804053-129808753 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 68.26 cM

Strain
Comparison

• SNPs within 2kb
  272 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802037	lncRNA gene	Chr5:129804053-129808753 (+)
129S1/SvImJ	ENSMUSG00200047889	lncRNA gene	Chr5:123549888-123554537 (+)
A/J	ENSMUSG00195051257	lncRNA gene	Chr5:123080160-123084812 (+)
AKR/J	ENSMUSG00220050717	lncRNA gene	Chr5:122560279-122564922 (+)
BALB/cJ	ENSMUSG00180046662	lncRNA gene	Chr5:123187540-123192193 (+)
C3H/HeJ	ENSMUSG00175040370	lncRNA gene	Chr5:125159939-125164582 (+)
C57BL/6NJ	ENSMUSG00215049001	lncRNA gene	Chr5:123222040-123226683 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034584	sense intronic lncRNA gene	Chr5:122602809-122608528 (+)
CAST/EiJ	ENSTCUG00005010855	lncRNA gene	Chr5:122436791-122441463 (+)
CBA/J	ENSMUSG00210008662	lncRNA gene	Chr5:123910597-123915240 (+)
DBA/2J	ENSMUSG00185008311	lncRNA gene	Chr5:126962548-126967191 (+)
FVB/NJ	ENSMUSG00205049913	lncRNA gene	Chr5:122844022-122848663 (+)
JF1/MsJ	ENSUMUG00000052175	lncRNA gene	Chr5:129847107-129851734 (+)
LP/J	ENSMUSG00230048383	lncRNA gene	Chr5:131065806-131070454 (+)
NOD/ShiLtJ	ENSMUSG00190047849	lncRNA gene	Chr5:122865574-122870216 (+)
NZO/HlLtJ	ENSMUSG00225014695	lncRNA gene	Chr5:138761010-138765653 (+)
PWK/PhJ	ENSLUMG00010019584	lncRNA gene	Chr5:121734988-121739614 (+)
SPRET/EiJ	ENSMSPG00010033461	lncRNA gene	Chr5:125145033-125149685 (+)
WSB/EiJ	ENSIUOG00005036285	lncRNA gene	Chr5:125538704-125543347 (+)

Homology

• Gene Tree
  Gm15903
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm15903
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000086916 (Evidence)
• NCBI Gene
  100504254

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086916	Ensembl Gene Model | MGI Sequence Detail	4701	C57BL/6J
transcript	ENSMUST00000199631	Ensembl | MGI Sequence Detail	3518	Not Applicable

References

• Summaries
  All 10

  Phenotypes 5
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Gm15903:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr49011	Chr5:129804107-129804119 (+)	60 bp