Gm16059 Gene Detail

Summary

• Symbol
  Gm16059
• Name
  predicted gene 16059

• Feature Type
  lncRNA gene
• IDs
  MGI:3802029
  NCBI Gene: 115488494
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:79310686-79313480 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 37.71 cM

Strain
Comparison

• SNPs within 2kb
  169 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802029	lncRNA gene	Chr15:79310686-79315853 (+)
129S1/SvImJ	ENSMUSG00200053777	lncRNA gene	Chr15:76423182-76427568 (+)
A/J	ENSMUSG00195051864	lncRNA gene	Chr15:76366987-76371372 (+)
AKR/J	ENSMUSG00220053179	lncRNA gene	Chr15:76410376-76414761 (+)
BALB/cJ	ENSMUSG00180053788	lncRNA gene	Chr15:76243970-76248355 (+)
C3H/HeJ	ENSMUSG00175053543	lncRNA gene	Chr15:76555204-76559589 (+)
C57BL/6NJ	ENSMUSG00215053546	lncRNA gene	Chr15:76321792-76326205 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002925	antisense lncRNA gene	Chr15:73428973-73433706 (+)
CAST/EiJ	ENSTCUG00005049225	lncRNA gene	Chr15:75865362-75869767 (+)
CBA/J	ENSMUSG00210050073	lncRNA gene	Chr15:76330354-76334739 (+)
DBA/2J	ENSMUSG00185052567	lncRNA gene	Chr15:76340236-76344621 (+)
FVB/NJ	ENSMUSG00205052508	lncRNA gene	Chr15:76060071-76064456 (+)
JF1/MsJ	ENSUMUG00000056128	lncRNA gene	Chr15:75919236-75924009 (+)
LP/J	ENSMUSG00230052601	lncRNA gene	Chr15:79671609-79675995 (+)
NOD/ShiLtJ	ENSMUSG00190053859	lncRNA gene	Chr15:76349067-76353453 (+)
NZO/HlLtJ	ENSMUSG00225053681	lncRNA gene	Chr15:80002470-80007015 (+)
PWK/PhJ	ENSLUMG00010052588	lncRNA gene	Chr15:76139290-76144065 (+)
SPRET/EiJ	ENSMSPG00010051585	lncRNA gene	Chr15:77800740-77805117 (+)
WSB/EiJ	ENSIUOG00005049686	lncRNA gene	Chr15:76406802-76411347 (+)

Homology

• Gene Tree
  Gm16059
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  21 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm16059
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000085802 (Evidence)
• NCBI Gene
  115488494

Representative Sequences			Length	Strain/Species
genomic	115488494	NCBI Gene Model | MGI Sequence Detail	2795	C57BL/6J
transcript	XR_003951551	RefSeq | MGI Sequence Detail	683	C57BL/6J

References

• Summaries
  All 28

  Diseases 1

  Phenotypes 21
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)

TSS for Gm16059:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr132096	Chr15:79313180-79313187 (+)	2,498 bp