Gm15879 Gene Detail

Summary

• Symbol
  Gm15879
• Name
  predicted gene 15879

• Feature Type
  lncRNA gene
• IDs
  MGI:3802012
  NCBI Gene: 102640095
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr16:3847355-3855767 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 2.37 cM

Strain
Comparison

• SNPs within 2kb
  221 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3802012	lncRNA gene	Chr16:3847355-3855767 (-)
129S1/SvImJ	ENSMUSG00200012098	lncRNA gene	Chr16:842073-847081 (-)
A/J	ENSMUSG00195011687	lncRNA gene	Chr16:394221-399237 (-)
AKR/J	ENSMUSG00220017620	lncRNA gene	Chr16:693405-698413 (-)
BALB/cJ	ENSMUSG00180009105	lncRNA gene	Chr16:642985-647993 (-)
C3H/HeJ	ENSMUSG00175031760	lncRNA gene	Chr16:834294-839302 (-)
C57BL/6NJ	ENSMUSG00215022880	lncRNA gene	Chr16:515531-520539 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002948	antisense lncRNA gene	Chr16:311880-315324 (-)
CAST/EiJ	ENSTCUG00005031976	lncRNA gene	Chr16:718667-723548 (-)
CBA/J	ENSMUSG00210012086	lncRNA gene	Chr16:851618-856626 (-)
DBA/2J	ENSMUSG00185010583	lncRNA gene	Chr16:796819-801827 (-)
FVB/NJ	ENSMUSG00205013341	lncRNA gene	Chr16:718096-723124 (-)
JF1/MsJ	ENSUMUG00000038755	lncRNA gene	Chr16:819145-823978 (-)
LP/J	ENSMUSG00230012769	lncRNA gene	Chr16:3337854-3342862 (-)
NOD/ShiLtJ	ENSMUSG00190026817	lncRNA gene	Chr16:872233-877241 (-)
NZO/HlLtJ	ENSMUSG00225023302	lncRNA gene	Chr16:6580190-6585198 (-)
PWK/PhJ	ENSLUMG00010018172	lncRNA gene	Chr16:691078-695956 (-)
SPRET/EiJ	ENSMSPG00010017605	lncRNA gene	Chr16:656272-661038 (-)
WSB/EiJ	ENSIUOG00005016594	lncRNA gene	Chr16:836889-841909 (-)

Homology

• Gene Tree
  Gm15879
  

Expression

• Assay Results
  597
• cDNA Data
  5

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27

• Ensembl
  ENSMUSG00000084790 (Evidence)
• NCBI Gene
  102640095

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084790	Ensembl Gene Model | MGI Sequence Detail	8413	C57BL/6J
transcript	ENSMUST00000257472	Ensembl | MGI Sequence Detail	2000	Not Applicable

Molecular
Reagents

• All nucleic 5

  cDNA 5

  
  

  Microarray probesets 1

References

• Summaries
  All 9
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm15879:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr139750	Chr16:3855728-3855746 (-)	30 bp