Gm16240 Gene Detail

Summary

• Symbol
  Gm16240
• Name
  predicted gene 16240

• Feature Type
  lncRNA gene
• IDs
  MGI:3801994
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:76128945-76130699 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 38.78 cM

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801994	lncRNA gene	Chr10:76128945-76130699 (+)
129S1/SvImJ	ENSMUSG00200050521	lncRNA gene	Chr10:72806098-72807793 (+)
A/J	ENSMUSG00195049723	lncRNA gene	Chr10:73142697-73144392 (+)
AKR/J	ENSMUSG00220048715	lncRNA gene	Chr10:72802428-72804123 (+)
BALB/cJ	ENSMUSG00180053367	lncRNA gene	Chr10:73157160-73158855 (+)
C3H/HeJ	ENSMUSG00175053100	lncRNA gene	Chr10:73028442-73030137 (+)
C57BL/6NJ	ENSMUSG00215053617	lncRNA gene	Chr10:72766076-72767771 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002519	antisense lncRNA gene	Chr10:70335650-70337380 (+)
CAST/EiJ	ENSTCUG00005052002	lncRNA gene	Chr10:72648025-72649740 (+)
CBA/J	ENSMUSG00210050232	lncRNA gene	Chr10:72884651-72886346 (+)
DBA/2J	ENSMUSG00185053285	lncRNA gene	Chr10:73226922-73228617 (+)
FVB/NJ	ENSMUSG00205051236	lncRNA gene	Chr10:72919571-72921266 (+)
JF1/MsJ	ENSUMUG00000056271	lncRNA gene	Chr10:74369893-74371950 (+)
LP/J	ENSMUSG00230051396	lncRNA gene	Chr10:74996490-74998185 (+)
NOD/ShiLtJ	ENSMUSG00190052123	lncRNA gene	Chr10:73204425-73206120 (+)
NZO/HlLtJ	ENSMUSG00225048683	lncRNA gene	Chr10:79292978-79294673 (+)
PWK/PhJ	ENSLUMG00010051614	lncRNA gene	Chr10:72766787-72768474 (+)
SPRET/EiJ	ENSMSPG00010048760	lncRNA gene	Chr10:74555642-74557287 (+)
WSB/EiJ	ENSIUOG00005051326	lncRNA gene	Chr10:72807951-72809666 (+)

Homology

• Gene Tree
  Gm16240
  

Human Diseases

• References
  2 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  34 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  1
• Targeted
  4
• Genomic Mutations
  5 involving Gm16240
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25

• Ensembl
  ENSMUSG00000089711 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000089711	Ensembl Gene Model | MGI Sequence Detail	1755	C57BL/6J
transcript	ENSMUST00000283048	Ensembl | MGI Sequence Detail	1118	Not Applicable

References

• Summaries
  All 39

  Diseases 2

  Phenotypes 34
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:361105 Tateossian H, et al., DYRK1A kinase triplication is the major cause of Otitis Media in Down Syndrome. Elife. 2025;

TSS for Gm16240:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr94170	Chr10:76128982-76128997 (+)	45 bp