Gm15908 Gene Detail

Summary

• Symbol
  Gm15908
• Name
  predicted gene 15908

• Feature Type
  lncRNA gene
• IDs
  MGI:3801931
  NCBI Gene: 101056149
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:34836906-34850757 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 14.16 cM

Strain
Comparison

• SNPs within 2kb
  606 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801931	lncRNA gene	Chr13:34836648-34886872 (+)
129S1/SvImJ	ENSMUSG00200012697	lncRNA gene	Chr13:32032795-32046645 (+)
A/J	ENSMUSG00195033338	lncRNA gene	Chr13:31118275-31132128 (+)
AKR/J	ENSMUSG00220031281	lncRNA gene	Chr13:30907565-30921420 (+)
BALB/cJ	ENSMUSG00180008761	lncRNA gene	Chr13:31422075-31435928 (+)
C3H/HeJ	ENSMUSG00175014725	lncRNA gene	Chr13:31371321-31385171 (+)
C57BL/6NJ	ENSMUSG00215013917	lncRNA gene	Chr13:31561481-31575331 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013389	unclassified non-coding RNA gene	Chr13:30110447-30124475 (+)
CAST/EiJ	ENSTCUG00005035569	lncRNA gene	Chr13:31443838-31457592 (+)
CBA/J	ENSMUSG00210011747	lncRNA gene	Chr13:31383825-31397677 (+)
DBA/2J	ENSMUSG00185034115	lncRNA gene	Chr13:32203228-32217078 (+)
FVB/NJ	ENSMUSG00205031659	lncRNA gene	Chr13:31091239-31105090 (+)
JF1/MsJ	ENSUMUG00000038081	lncRNA gene	Chr13:31787137-31801364 (+)
LP/J	ENSMUSG00230015583	lncRNA gene	Chr13:41527639-41541491 (+)
NOD/ShiLtJ	ENSMUSG00190012605	lncRNA gene	Chr13:31613335-31627187 (+)
NZO/HlLtJ	ENSMUSG00225035466	lncRNA gene	Chr13:35338626-35352476 (+)
PWK/PhJ	ENSLUMG00010032000	lncRNA gene	Chr13:30620806-30635329 (+)
SPRET/EiJ	ENSMSPG00010010854	lncRNA gene	Chr13:30516702-30530555 (+)
WSB/EiJ	ENSIUOG00005028195	lncRNA gene	Chr13:30767740-30781603 (+)

Homology

• Gene Tree
  Gm15908
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  8 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm15908
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  32
• RefSeq
  1

• Ensembl
  ENSMUSG00000086786 (Evidence)
• NCBI Gene
  101056149

Representative Sequences			Length	Strain/Species
genomic	101056149	NCBI Gene Model | MGI Sequence Detail	13852	C57BL/6J
transcript	NR_105041	RefSeq | MGI Sequence Detail	1091	ZRU/MplStud

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 17

  Phenotypes 8
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:141688 Goldsworthy M, et al., Role of the transcription factor sox4 in insulin secretion and impaired glucose tolerance. Diabetes. 2008 Aug;57(8):2234-44

TSS for Gm15908:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr119223	Chr13:34836893-34836924 (+)	3 bp