About   Help   FAQ
Hopxos Gene Detail
Summary
  • Symbol
    Hopxos
  • Name
    HOP homeobox, opposite strand
  • Synonyms
    Gm15830
Location &
Maps
more
  • Sequence Map
    Chr5:77246086-77250160 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 41.45 cM
Strain
Comparison
more
  • SNPs within 2kb
    264 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3801917
 antisense lncRNA gene Chr5:77240550-77250160 (+)
129S1/SvImJ ENSMUSG00200001275
 lncRNA gene Chr5:72932761-72940528 (+)
A/J ENSMUSG00195010747
 lncRNA gene Chr5:72239309-72247084 (+)
AKR/J ENSMUSG00220014892
 lncRNA gene Chr5:72351250-72359055 (+)
BALB/cJ ENSMUSG00180000105
 lncRNA gene Chr5:72004387-72012168 (+)
C3H/HeJ ENSMUSG00175004261
 lncRNA gene Chr5:74040552-74048353 (+)
C57BL/6NJ ENSMUSG00215000528
 lncRNA gene Chr5:72819136-72826905 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003697
 antisense lncRNA gene Chr5:69981586-69990020 (+)
CAST/EiJ ENSTCUG00005013760
 lncRNA gene Chr5:71788828-71796623 (+)
CBA/J ENSMUSG00210000524
 lncRNA gene Chr5:72978481-72986276 (+)
DBA/2J ENSMUSG00185017083
 lncRNA gene Chr5:74808432-74816231 (+)
FVB/NJ ENSMUSG00205030541
 lncRNA gene Chr5:71766757-71774560 (+)
JF1/MsJ ENSUMUG00000006897
 lncRNA gene Chr5:79297121-79304961 (+)
LP/J ENSMUSG00230022913
 lncRNA gene Chr5:79506714-79514481 (+)
NOD/ShiLtJ ENSMUSG00190007714
 lncRNA gene Chr5:71929708-71937486 (+)
NZO/HlLtJ ENSMUSG00225034726
 lncRNA gene Chr5:84553734-84561505 (+)
PWK/PhJ ENSLUMG00010007542
 lncRNA gene Chr5:71869847-71877704 (+)
SPRET/EiJ ENSMSPG00010009982
 lncRNA gene Chr5:73874308-73889405 (+)
WSB/EiJ ENSIUOG00005018757
 lncRNA gene Chr5:74775002-74782757 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    7
  • Chemically induced (other)
    2
  • Gene trapped
    4
  • Spontaneous
    1
  • Genomic Mutations
    3 involving Hopxos
  • Find Mice (IMSR)
    1 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 102637820 NCBI Gene Model | MGI Sequence Detail 4075 C57BL/6J ±  kb
transcript XR_880408 RefSeq | MGI Sequence Detail 982 C57BL/6J  
For the selected sequence
References
more
  • Summaries
    All 12
    Phenotypes 5
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory