Gm16234 Gene Detail

Summary

• Symbol
  Gm16234
• Name
  predicted gene 16234

• Feature Type
  lncRNA gene
• IDs
  MGI:3801867
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:14539964-14544062 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 5.50 cM

Strain
Comparison

• SNPs within 2kb
  27 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801867	lncRNA gene	Chr10:14539964-14544062 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002839	antisense lncRNA gene	Chr10:12158240-12162279 (+)
A/J	MGP_AJ_G0002816	antisense lncRNA gene	Chr10:11677329-11681361 (+)
AKR/J	MGP_AKRJ_G0002797	antisense lncRNA gene	Chr10:11932698-11936734 (+)
BALB/cJ	MGP_BALBcJ_G0002803	antisense lncRNA gene	Chr10:11704009-11708046 (+)
C3H/HeJ	MGP_C3HHeJ_G0002761	antisense lncRNA gene	Chr10:12123507-12127544 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002945	antisense lncRNA gene	Chr10:12451271-12455339 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002491	antisense lncRNA gene	Chr10:10902526-10906233 (+)
CAST/EiJ	MGP_CASTEiJ_G0002733	antisense lncRNA gene	Chr10:11996289-12000329 (+)
CBA/J	MGP_CBAJ_G0002756	antisense lncRNA gene	Chr10:12939874-12943911 (+)
DBA/2J	MGP_DBA2J_G0002763	antisense lncRNA gene	Chr10:11612379-11616388 (+)
FVB/NJ	MGP_FVBNJ_G0002783	antisense lncRNA gene	Chr10:11405828-11409851 (+)
LP/J	MGP_LPJ_G0002839	antisense lncRNA gene	Chr10:11992977-11998360 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002773	antisense lncRNA gene	Chr10:12811556-12817307 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002950	antisense lncRNA gene	Chr10:11855755-11859805 (+)
PWK/PhJ	MGP_PWKPhJ_G0002691	antisense lncRNA gene	Chr10:11435410-11439443 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002641	antisense lncRNA gene	Chr10:11984100-11987205 (+)
WSB/EiJ	MGP_WSBEiJ_G0002762	antisense lncRNA gene	Chr10:11906926-11910025 (+)

Homology

• Gene Tree
  Gm16234
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000085572 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085572	Ensembl Gene Model | MGI Sequence Detail	4099	C57BL/6J
transcript	ENSMUST00000124976	Ensembl | MGI Sequence Detail	815	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;