Gm16166 Pseudogene Detail

Summary

• Symbol
  Gm16166
• Name
  predicted gene 16166

• Feature Type
  pseudogene
• IDs
  MGI:3801807
  NCBI Gene: 100384883
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:120764091-120764877 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 68.89 cM

Strain
Comparison

• SNPs within 2kb
  23 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801807	pseudogene	Chr10:120764067-120764926 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010549	pseudogene	Chr10:124138178-124138964 (+)
A/J	MGP_AJ_G0010543	pseudogene	Chr10:119217166-119217952 (+)
AKR/J	MGP_AKRJ_G0010503	pseudogene	Chr10:122771555-122772341 (+)
BALB/cJ	MGP_BALBcJ_G0010517	pseudogene	Chr10:119606224-119607010 (+)
C3H/HeJ	MGP_C3HHeJ_G0010441	pseudogene	Chr10:122973783-122974569 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010784	pseudogene	Chr10:128361713-128362499 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009460	pseudogene	Chr10:113550464-113551214 (+)
CAST/EiJ	MGP_CASTEiJ_G0010266	pseudogene	Chr10:123318593-123321028 (+)
CBA/J	MGP_CBAJ_G0010412	pseudogene	Chr10:133599739-133600525 (+)
DBA/2J	MGP_DBA2J_G0010441	pseudogene	Chr10:118349511-118350297 (+)
FVB/NJ	MGP_FVBNJ_G0010459	pseudogene	Chr10:117333084-117333870 (+)
LP/J	MGP_LPJ_G0010531	pseudogene	Chr10:124681517-124682303 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010436	pseudogene	Chr10:136161547-136162333 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010764	pseudogene	Chr10:122781727-122782513 (+)
PWK/PhJ	MGP_PWKPhJ_G0010166	pseudogene	Chr10:118458413-118459294 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009979	pseudogene	Chr10:121694678-121695465 (+)
WSB/EiJ	MGP_WSBEiJ_G0010328	pseudogene	Chr10:123027832-123028618 (+)

Homology

• Gene Tree
  Gm16166
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082936 (Evidence)
• NCBI Gene
  100384883

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082936	Ensembl Gene Model | MGI Sequence Detail	787	C57BL/6J
transcript	ENSMUST00000118291	Ensembl | MGI Sequence Detail	787	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;