Gm16104 MGI Mouse Gene Detail - MGI:3801749

Sequence Map

Chr10:81245409-81247413 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801749	lncRNA gene	Chr10:81245348-81247427 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002880	antisense lncRNA gene	Chr10:82123891-82125895 (+)
A/J	MGP_AJ_G0002857	antisense lncRNA gene	Chr10:79214154-79216158 (+)
AKR/J	MGP_AKRJ_G0002838	antisense lncRNA gene	Chr10:81389519-81391523 (+)
BALB/cJ	MGP_BALBcJ_G0002845	antisense lncRNA gene	Chr10:79433731-79435735 (+)
C3H/HeJ	MGP_C3HHeJ_G0002801	antisense lncRNA gene	Chr10:81491909-81493913 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002988	antisense lncRNA gene	Chr10:84942590-84944594 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002531	antisense lncRNA gene	Chr10:75412519-75414521 (+)
CAST/EiJ	MGP_CASTEiJ_G0002773	antisense lncRNA gene	Chr10:81723776-81725780 (+)
CBA/J	MGP_CBAJ_G0002797	antisense lncRNA gene	Chr10:88260413-88262417 (+)
DBA/2J	MGP_DBA2J_G0002804	antisense lncRNA gene	Chr10:78417972-78419976 (+)
FVB/NJ	MGP_FVBNJ_G0002823	antisense lncRNA gene	Chr10:77671500-77673504 (+)
LP/J	MGP_LPJ_G0002880	antisense lncRNA gene	Chr10:82573727-82575731 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002813	antisense lncRNA gene	Chr10:90100036-90102040 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002991	antisense lncRNA gene	Chr10:81399633-81401637 (+)
PWK/PhJ	MGP_PWKPhJ_G0002731	antisense lncRNA gene	Chr10:78312713-78314721 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002680	antisense lncRNA gene	Chr10:80348629-80350620 (+)
WSB/EiJ	MGP_WSBEiJ_G0002802	antisense lncRNA gene	Chr10:81434242-81436246 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	102634174	NCBI Gene Model \| MGI Sequence Detail	2005	C57BL/6J	± kb
	transcript	NR_152732	RefSeq \| MGI Sequence Detail	401	ZRU/MplStud

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Summaries

All 15

Phenotypes 8
Earliest

J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
Latest

J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm16104:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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