Gm15740 Pseudogene Detail

Summary

• Symbol
  Gm15740
• Name
  predicted gene 15740
• Synonyms
  EG666603

• Feature Type
  pseudogene
• IDs
  MGI:3783182
  NCBI Gene: 666603
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:76844738-76846029 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 40.98 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783182	pseudogene	Chr13:76844619-76846226 (+)
129S1/SvImJ	ENSMUSG00200006099	pseudogene	Chr13:71250165-71251457 (+)
A/J	ENSMUSG00195026255	pseudogene	Chr13:71814410-71815702 (+)
AKR/J	ENSMUSG00220040803	pseudogene	Chr13:70388426-70389718 (+)
BALB/cJ	ENSMUSG00180001514	pseudogene	Chr13:72312634-72313926 (+)
C3H/HeJ	ENSMUSG00175019963	pseudogene	Chr13:72583827-72585119 (+)
C57BL/6NJ	ENSMUSG00215002565	pseudogene	Chr13:72419390-72420681 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009891	pseudogene	Chr13:71386241-71387526 (+)
CAST/EiJ	ENSTCUG00005004167	pseudogene	Chr13:71875839-71877130 (+)
CBA/J	ENSMUSG00210005903	pseudogene	Chr13:71892730-71894022 (+)
DBA/2J	ENSMUSG00185018828	pseudogene	Chr13:75580840-75582132 (+)
FVB/NJ	ENSMUSG00205013901	pseudogene	Chr13:71292871-71294163 (+)
JF1/MsJ	ENSUMUG00000035576	pseudogene	Chr13:75364520-75365811 (+)
LP/J	ENSMUSG00230028115	pseudogene	Chr13:85508141-85509433 (+)
NOD/ShiLtJ	ENSMUSG00190008850	pseudogene	Chr13:71915027-71916319 (+)
NZO/HlLtJ	ENSMUSG00225028432	pseudogene	Chr13:78031248-78032540 (+)
PWK/PhJ	ENSLUMG00010014783	pseudogene	Chr13:71466010-71467301 (+)
SPRET/EiJ	ENSMSPG00010001421	pseudogene	Chr13:72359909-72361200 (+)
WSB/EiJ	ENSIUOG00005017927	pseudogene	Chr13:71141700-71142991 (+)

Homology

• Gene Tree
  Gm15740
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm15740
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000090027 (Evidence)
• NCBI Gene
  666603

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090027	Ensembl Gene Model | MGI Sequence Detail	1292	C57BL/6J
transcript	ENSMUST00000159703	Ensembl | MGI Sequence Detail	1292	Not Applicable

Other
Accession IDs

MGI:3643113

References

• Summaries
  All 10

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69