Gm15710 Pseudogene Detail

Summary

• Symbol
  Gm15710
• Name
  predicted gene 15710

• Feature Type
  pseudogene
• IDs
  MGI:3783151
  NCBI Gene: 100040605
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:92288153-92288788 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 46.06 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  86 from dbSNP Build 142
• Strain Annotations
  31

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783151	pseudogene	Chr5:92288097-92288828 (-)
129S1/SvImJ	ENSMUSG00200021254	pseudogene	Chr19:11861541-11862177 (-)
129S1/SvImJ	ENSMUSG00200009358	pseudogene	Chr5:88031976-88032611 (-)
A/J	ENSMUSG00195026098	pseudogene	Chr5:87191170-87191805 (-)
A/J	ENSMUSG00195019403	pseudogene	Chr19:12001554-12002190 (-)
AKR/J	ENSMUSG00220012642	pseudogene	Chr5:87341653-87342288 (-)
BALB/cJ	ENSMUSG00180020600	pseudogene	Chr19:12369651-12370287 (-)
BALB/cJ	ENSMUSG00180027034	pseudogene	Chr5:87036035-87036670 (-)
BALB/cJ	ENSMUSG00180004778	pseudogene	Chr14:88576778-88577410 (+)
C3H/HeJ	ENSMUSG00175004075	pseudogene	Chr19:11718637-11719273 (-)
C3H/HeJ	ENSMUSG00175043842	pseudogene	Chr5:89136807-89137442 (-)
C3H/HeJ	ENSMUSG00175002797	pseudogene	Chr14:90442910-90443542 (+)
C57BL/6NJ	ENSMUSG00215028087	pseudogene	Chr19:11774806-11775442 (-)
C57BL/6NJ	ENSMUSG00215032365	pseudogene	Chr5:87888417-87889052 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210007985	pseudogene	Chr14:89146154-89146786 (+)
CBA/J	ENSMUSG00210012973	pseudogene	Chr19:11917099-11917735 (-)
CBA/J	ENSMUSG00210006945	pseudogene	Chr5:87915540-87916175 (-)
DBA/2J	ENSMUSG00185011534	pseudogene	Chr14:94330231-94330863 (+)
DBA/2J	ENSMUSG00185014208	pseudogene	Chr19:12326413-12327049 (-)
DBA/2J	ENSMUSG00185040948	pseudogene	Chr5:89852280-89852915 (-)
FVB/NJ	ENSMUSG00205004515	pseudogene	Chr19:11775357-11775993 (-)
FVB/NJ	ENSMUSG00205014570	pseudogene	Chr14:88234423-88235055 (+)
FVB/NJ	ENSMUSG00205034165	pseudogene	Chr5:86740994-86741629 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230022619	pseudogene	Chr19:13233142-13233778 (-)
LP/J	ENSMUSG00230028047	pseudogene	Chr5:94543176-94543811 (-)
NOD/ShiLtJ	ENSMUSG00190021697	pseudogene	Chr19:11725924-11726560 (-)
NOD/ShiLtJ	ENSMUSG00190038657	pseudogene	Chr5:86819788-86820423 (-)
NZO/HlLtJ	ENSMUSG00225047435	pseudogene	Chr19:16940566-16941202 (-)
NZO/HlLtJ	ENSMUSG00225009470	pseudogene	Chr5:99691034-99691669 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005029352	pseudogene	Chr5:89814336-89814971 (-)
WSB/EiJ	ENSIUOG00005007533	pseudogene	Chr19:11451750-11452386 (-)

Homology

• Gene Tree
  Gm15710
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  1
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm15710
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  35
• RefSeq
  1

• Ensembl
  ENSMUSG00000084111 (Evidence)
• NCBI Gene
  100040605

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084111	Ensembl Gene Model | MGI Sequence Detail	636	C57BL/6J
transcript	ENSMUST00000121821	Ensembl | MGI Sequence Detail	636	Not Applicable

Other
Accession IDs

MGI:3779131

References

• Summaries
  All 12

  Phenotypes 6
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Gm15710:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr51849	Chr5:92288824-92288836 (-)	-42 bp