Gm15653 Pseudogene Detail

Summary

• Symbol
  Gm15653
• Name
  predicted gene 15653
• Synonyms
  EG627733

• Feature Type
  pseudogene
• IDs
  MGI:3783097
  NCBI Gene: 100862249
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:73633790-73634696 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 38.85 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  199 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783097	pseudogene	Chr5:73633700-73634719 (-)
129S1/SvImJ	ENSMUSG00200036709	pseudogene	Chr5:69293067-69293973 (-)
A/J	ENSMUSG00195035475	pseudogene	Chr5:68610054-68610960 (-)
AKR/J	ENSMUSG00220004446	pseudogene	Chr5:68720744-68721650 (-)
BALB/cJ	ENSMUSG00180025965	pseudogene	Chr5:68367077-68367983 (-)
C3H/HeJ	ENSMUSG00175028103	pseudogene	Chr5:70437561-70438449 (-)
C57BL/6NJ	ENSMUSG00215006811	pseudogene	Chr5:69209030-69209936 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011641	pseudogene	Chr5:66414555-66415434 (-)
CAST/EiJ	ENSTCUG00005032932	pseudogene	Chr5:68187042-68187930 (-)
CBA/J	ENSMUSG00210023940	pseudogene	Chr5:69375657-69376545 (-)
DBA/2J	ENSMUSG00185016523	pseudogene	Chr5:71205455-71206343 (-)
FVB/NJ	ENSMUSG00205034012	pseudogene	Chr5:68134011-68134917 (-)
JF1/MsJ	ENSUMUG00000007273	pseudogene	Chr5:75695070-75695958 (-)
LP/J	ENSMUSG00230021814	pseudogene	Chr5:75867323-75868229 (-)
NOD/ShiLtJ	ENSMUSG00190004393	pseudogene	Chr5:68304296-68305184 (-)
NZO/HlLtJ	ENSMUSG00225010278	pseudogene	Chr5:80930235-80931141 (-)
PWK/PhJ	ENSLUMG00010014915	pseudogene	Chr5:68255236-68256124 (-)
SPRET/EiJ	ENSMSPG00010036153	pseudogene	Chr5:70262939-70263820 (-)
WSB/EiJ	ENSIUOG00005018324	pseudogene	Chr5:71147246-71148152 (-)

Homology

• Gene Tree
  Gm15653
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm15653
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000082039 (Evidence)
• NCBI Gene
  100862249

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082039	Ensembl Gene Model | MGI Sequence Detail	907	C57BL/6J
transcript	ENSMUST00000119247	Ensembl | MGI Sequence Detail	907	Not Applicable

Other
Accession IDs

MGI:3644278

References

• Summaries
  All 11

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17