Gm15638 Gene Detail

Summary

• Symbol
  Gm15638
• Name
  predicted gene 15638
• Synonyms
  Gm41457

• Feature Type
  lncRNA gene
• IDs
  MGI:3783082
  NCBI Gene: 100503378
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr16:45765969-45791733 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 30.45 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1076 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783082	lncRNA gene	Chr16:45765903-45791733 (+)
129S1/SvImJ	ENSMUSG00200021606	lncRNA gene	Chr16:42655716-42681495 (+)
A/J	ENSMUSG00195003655	lncRNA gene	Chr16:42251861-42277676 (+)
AKR/J	ENSMUSG00220022671	lncRNA gene	Chr16:42610699-42636508 (+)
BALB/cJ	ENSMUSG00180029781	lncRNA gene	Chr16:42456774-42482585 (+)
C3H/HeJ	ENSMUSG00175026835	lncRNA gene	Chr16:42732829-42758691 (+)
C57BL/6NJ	ENSMUSG00215008124	lncRNA gene	Chr16:42550580-42576390 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002976	antisense lncRNA gene	Chr16:43105592-43131902 (+)
CAST/EiJ	ENSTCUG00005013030	lncRNA gene	Chr16:42942233-42968131 (+)
CBA/J	ENSMUSG00210016970	lncRNA gene	Chr16:42754908-42780774 (+)
DBA/2J	ENSMUSG00185010922	lncRNA gene	Chr16:42636409-42662220 (+)
FVB/NJ	ENSMUSG00205013064	lncRNA gene	Chr16:42514776-42540612 (+)
JF1/MsJ	ENSUMUG00000030931	lncRNA gene	Chr16:42868433-42894302 (+)
LP/J	ENSMUSG00230029337	lncRNA gene	Chr16:45202943-45228750 (+)
NOD/ShiLtJ	ENSMUSG00190019215	lncRNA gene	Chr16:42647176-42672985 (+)
NZO/HlLtJ	ENSMUSG00225028856	lncRNA gene	Chr16:48294685-48320492 (+)
PWK/PhJ	ENSLUMG00010028316	lncRNA gene	Chr16:42732397-42758186 (+)
SPRET/EiJ	ENSMSPG00010007771	lncRNA gene	Chr16:42914472-42940517 (+)
WSB/EiJ	ENSIUOG00005013573	lncRNA gene	Chr16:42832852-42858827 (+)

Homology

• Gene Tree
  Gm15638
  

Expression

• Assay Results
  597
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  50
• RefSeq
  2

• Ensembl
  ENSMUSG00000085826 (Evidence)
• NCBI Gene
  100503378

Representative Sequences			Length	Strain/Species
genomic	100503378	NCBI Gene Model | MGI Sequence Detail	25765	C57BL/6J
transcript	NR_152226	RefSeq | MGI Sequence Detail	2945	ZRU/MplStud

Molecular
Reagents

• All nucleic 4

  cDNA 4

Other
Accession IDs

MGI:5624342

References

• Summaries
  All 9
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm15638:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr138636	Chr16:45765947-45766004 (+)	7 bp