Gm15587 Gene Detail

Summary

• Symbol
  Gm15587
• Name
  predicted gene 15587

• Feature Type
  lncRNA gene
• IDs
  MGI:3783035
  NCBI Gene: 115490171
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr5:24571190-24588612 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 11.33 cM

Strain
Comparison

• SNPs within 2kb
  477 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783035	lncRNA gene	Chr5:24571190-24588612 (-)
129S1/SvImJ	ENSMUSG00200014320	lncRNA gene	Chr5:20178185-20195577 (-)
A/J	ENSMUSG00195041114	lncRNA gene	Chr5:19649150-19666570 (-)
AKR/J	ENSMUSG00220040013	lncRNA gene	Chr5:19731788-19749221 (-)
BALB/cJ	ENSMUSG00180027254	lncRNA gene	Chr5:19516122-19533555 (-)
C3H/HeJ	ENSMUSG00175048706	lncRNA gene	Chr5:21447391-21464807 (-)
C57BL/6NJ	ENSMUSG00215042660	lncRNA gene	Chr5:20083067-20100495 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003638	antisense lncRNA gene	Chr5:19281170-19298797 (-)
CAST/EiJ	ENSTCUG00005003390	lncRNA gene	Chr5:19651894-19669652 (-)
CBA/J	ENSMUSG00210048677	lncRNA gene	Chr5:20486673-20504091 (-)
DBA/2J	ENSMUSG00185038664	lncRNA gene	Chr5:22019013-22036324 (-)
FVB/NJ	ENSMUSG00205036685	lncRNA gene	Chr5:19239149-19256585 (-)
JF1/MsJ	ENSUMUG00000007185	lncRNA gene	Chr5:26581897-26599222 (-)
LP/J	ENSMUSG00230025618	lncRNA gene	Chr5:26460183-26477567 (-)
NOD/ShiLtJ	ENSMUSG00190005095	lncRNA gene	Chr5:19553122-19570507 (-)
NZO/HlLtJ	ENSMUSG00225020391	lncRNA gene	Chr5:31869209-31886650 (-)
PWK/PhJ	ENSLUMG00010035972	lncRNA gene	Chr5:19620500-19637844 (-)
SPRET/EiJ	ENSMSPG00010045788	lncRNA gene	Chr5:20486205-20503935 (-)
WSB/EiJ	ENSIUOG00005042248	lncRNA gene	Chr5:22375561-22392989 (-)

Homology

• Gene Tree
  Gm15587
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Gene trapped
  1
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm15587
• Find Mice (IMSR)
  3 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000086769 (Evidence)
• NCBI Gene
  115490171

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086769	Ensembl Gene Model | MGI Sequence Detail	17423	C57BL/6J
transcript	ENSMUST00000146326	Ensembl | MGI Sequence Detail	3493	Not Applicable

References

• Summaries
  All 11

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm15587:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr50314	Chr5:24588606-24588619 (-)	-1 bp
Tssr50313	Chr5:24578935-24578961 (-)	9,664 bp