Gm15544 Pseudogene Detail

Summary

• Symbol
  Gm15544
• Name
  predicted gene 15544
• Synonyms
  EG384647

• Feature Type
  pseudogene
• IDs
  MGI:3782993
  NCBI Gene: 384647
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:80078958-80080488 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 45.65 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  191 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782993	pseudogene	Chr7:80078892-80080685 (+)
129S1/SvImJ	ENSMUSG00200035519	pseudogene	Chr7:66895727-66897257 (+)
A/J	ENSMUSG00195042566	pseudogene	Chr7:71308139-71309669 (+)
AKR/J	ENSMUSG00220038603	pseudogene	Chr7:64850170-64851700 (+)
BALB/cJ	ENSMUSG00180013709	pseudogene	Chr7:68033257-68034787 (+)
C3H/HeJ	ENSMUSG00175022479	pseudogene	Chr7:68807811-68809341 (+)
C57BL/6NJ	ENSMUSG00215034797	pseudogene	Chr7:67905209-67906739 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012201	pseudogene	Chr7:82993419-82994961 (+)
CAST/EiJ	ENSTCUG00005046321	pseudogene	Chr7:71355265-71356797 (+)
CBA/J	ENSMUSG00210024120	pseudogene	Chr7:68659039-68660569 (+)
DBA/2J	ENSMUSG00185047544	pseudogene	Chr7:72981841-72983371 (+)
FVB/NJ	ENSMUSG00205028058	pseudogene	Chr7:68541328-68542858 (+)
JF1/MsJ	ENSUMUG00000034675	pseudogene	Chr7:77642651-77644183 (+)
LP/J	ENSMUSG00230016993	pseudogene	Chr7:79071322-79072852 (+)
NOD/ShiLtJ	ENSMUSG00190020212	pseudogene	Chr7:68799037-68800567 (+)
NZO/HlLtJ	ENSMUSG00225043616	pseudogene	Chr7:77310200-77311730 (+)
PWK/PhJ	ENSLUMG00010018176	pseudogene	Chr7:67234266-67235809 (+)
SPRET/EiJ	ENSMSPG00010026074	pseudogene	Chr7:67641538-67643080 (+)
WSB/EiJ	ENSIUOG00005023877	pseudogene	Chr7:69147185-69148715 (+)

Homology

• Gene Tree
  Gm15544
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm15544
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000081664 (Evidence)
• NCBI Gene
  384647

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081664	Ensembl Gene Model | MGI Sequence Detail	1531	C57BL/6J
transcript	ENSMUST00000118776	Ensembl | MGI Sequence Detail	1531	Not Applicable

Other
Accession IDs

MGI:3647918

References

• Summaries
  All 18

  Phenotypes 11
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67