Gm15523 Gene Detail

Summary

• Symbol
  Gm15523
• Name
  predicted gene 15523

• Feature Type
  lncRNA gene
• IDs
  MGI:3782970
  NCBI Gene: 102632708
• Alliance
  genome feature page
• Transcription Start Sites
  6 TSS

Location &
Maps

• Sequence Map
  Chr12:103303132-103315266 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 52.91 cM

Strain
Comparison

• SNPs within 2kb
  402 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782970	lncRNA gene	Chr12:103303115-103341814 (+)
129S1/SvImJ	ENSMUSG00200026949	lncRNA gene	Chr12:95103330-95114355 (+)
A/J	ENSMUSG00195020872	lncRNA gene	Chr12:97630109-97641135 (+)
AKR/J	ENSMUSG00220044688	lncRNA gene	Chr12:95577831-95588852 (+)
BALB/cJ	ENSMUSG00180036319	lncRNA gene	Chr12:96823826-96834847 (+)
C3H/HeJ	ENSMUSG00175036948	lncRNA gene	Chr12:99442865-99453889 (+)
C57BL/6NJ	ENSMUSG00215041057	lncRNA gene	Chr12:96104755-96115784 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002800	antisense lncRNA gene	Chr12:98018694-98029879 (+)
CAST/EiJ	ENSTCUG00005021341	lncRNA gene	Chr12:95494596-95505788 (+)
CBA/J	ENSMUSG00210014757	lncRNA gene	Chr12:96477173-96488198 (+)
DBA/2J	ENSMUSG00185046307	lncRNA gene	Chr12:98281837-98292863 (+)
FVB/NJ	ENSMUSG00205019768	lncRNA gene	Chr12:95495036-95506062 (+)
JF1/MsJ	ENSUMUG00000026904	lncRNA gene	Chr12:103017353-103028427 (+)
LP/J	ENSMUSG00230030962	lncRNA gene	Chr12:105368311-105379334 (+)
NOD/ShiLtJ	ENSMUSG00190032854	lncRNA gene	Chr12:89649686-89660714 (-)
NZO/HlLtJ	ENSMUSG00225038932	lncRNA gene	Chr12:107079654-107090680 (+)
PWK/PhJ	ENSLUMG00010013394	lncRNA gene	Chr12:96454732-96465784 (+)
SPRET/EiJ	ENSMSPG00010019505	lncRNA gene	Chr12:98971575-98982839 (+)
WSB/EiJ	ENSIUOG00005010413	lncRNA gene	Chr12:95508496-95519523 (+)

Homology

• Gene Tree
  Gm15523
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm15523
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  35
• RefSeq
  2

• Ensembl
  ENSMUSG00000090185 (Evidence)
• NCBI Gene
  102632708

Representative Sequences			Length	Strain/Species
genomic	102632708	NCBI Gene Model | MGI Sequence Detail	12135	C57BL/6J
transcript	NR_166806	RefSeq | MGI Sequence Detail	1925	ZRU/MplStud

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm15523:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr114800	Chr12:103303114-103303141 (+)	-4 bp
Tssr114801	Chr12:103303147-103303158 (+)	21 bp
Tssr114802	Chr12:103303371-103303380 (+)	244 bp
Tssr114803	Chr12:103307781-103307813 (+)	4,665 bp
Tssr114804	Chr12:103312501-103312518 (+)	9,378 bp
Tssr114805	Chr12:103313026-103313053 (+)	9,908 bp