Gm15321 Pseudogene Detail

Summary

• Symbol
  Gm15321
• Name
  predicted gene 15321
• Synonyms
  EG667442

• Feature Type
  pseudogene
• IDs
  MGI:3782935
  NCBI Gene: 102633588
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:34611377-34611664 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 17.99 cM
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782935	pseudogene	Chr17:34611377-34611794 (+)
129S1/SvImJ	ENSMUSG00200051620	pseudogene	Chr17:30314516-30314803 (+)
A/J	ENSMUSG00195047562	pseudogene	Chr17:31181253-31181540 (+)
AKR/J	ENSMUSG00220054022	pseudogene	Chr17:30208888-30209175 (+)
BALB/cJ	ENSMUSG00180044102	pseudogene	Chr17:30562785-30563073 (+)
C3H/HeJ	ENSMUSG00175041914	pseudogene	Chr17:30095031-30095318 (+)
C57BL/6NJ	ENSMUSG00215053311	pseudogene	Chr17:30154690-30154977 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010166	pseudogene	Chr17:31202818-31203105 (+)
CAST/EiJ	ENSTCUG00005052062	pseudogene	Chr17:31137696-31137982 (+)
CBA/J	ENSMUSG00210051134	pseudogene	Chr17:29917134-29917421 (+)
DBA/2J	ENSMUSG00185054543	pseudogene	Chr17:32582066-32582354 (+)
FVB/NJ	ENSMUSG00205053831	pseudogene	Chr17:30431850-30432124 (+)
JF1/MsJ	ENSUMUG00000057186	pseudogene	Chr17:31843963-31844252 (+)
LP/J	ENSMUSG00230054804	pseudogene	Chr17:33712820-33713107 (+)
NOD/ShiLtJ	ENSMUSG00190054302	pseudogene	Chr17:30060768-30061056 (+)
NZO/HlLtJ	ENSMUSG00225054899	pseudogene	Chr17:35744713-35745000 (+)
PWK/PhJ	ENSLUMG00010053567	pseudogene	Chr17:29700190-29700476 (+)
SPRET/EiJ	ENSMSPG00010050092	pseudogene	Chr17:30841903-30842190 (+)
WSB/EiJ	ENSIUOG00005052326	pseudogene	Chr17:30768500-30768786 (+)

Homology

• Gene Tree
  Gm15321
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm15321
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000083522 (Evidence)
• NCBI Gene
  102633588

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083522	Ensembl Gene Model | MGI Sequence Detail	288	C57BL/6J
transcript	ENSMUST00000121290	Ensembl | MGI Sequence Detail	288	Not Applicable

Other
Accession IDs

MGI:3644492

References

• Summaries
  All 8

  Phenotypes 1
• Earliest
  J:291989 Jandke A, et al., Butyrophilin-like proteins display combinatorial diversity in selecting and maintaining signature intraepithelial gammadelta T cell compartments. Nat Commun. 2020 Jul 28;11(1):3769

TSS for Gm15321:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr144026	Chr17:34611280-34611288 (+)	-93 bp