Gm4613 Pseudogene Detail

Summary

• Symbol
  Gm4613
• Name
  predicted gene 4613

• Feature Type
  pseudogene
• IDs
  MGI:3782796
  NCBI Gene: 100043732
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:25528027-25528302 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 14.06 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782796	pseudogene	Chr7:25527970-25528330 (-)
129S1/SvImJ	ENSMUSG00200045249	pseudogene	Chr7:15525175-15525450 (-)
A/J	ENSMUSG00195053893	pseudogene	Chr7:17969098-17969373 (-)
AKR/J	ENSMUSG00220053308	pseudogene	Chr7:26421213-26421488 (+)
BALB/cJ	ENSMUSG00180054028	pseudogene	Chr7:16041047-16041322 (-)
C3H/HeJ	ENSMUSG00175052946	pseudogene	Chr7:17085092-17085367 (-)
C57BL/6NJ	ENSMUSG00215054931	pseudogene	Chr7:15444999-15445274 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052860	pseudogene	Chr7:17137335-17137610 (-)
CBA/J	ENSMUSG00210053550	pseudogene	Chr7:16270797-16271072 (-)
DBA/2J	ENSMUSG00185056060	pseudogene	Chr7:19484605-19484880 (-)
FVB/NJ	ENSMUSG00205051707	pseudogene	Chr7:16281489-16281764 (-)
JF1/MsJ	ENSUMUG00000057829	pseudogene	Chr7:23768213-23768488 (-)
LP/J	ENSMUSG00230053817	pseudogene	Chr7:24751286-24751561 (-)
NOD/ShiLtJ	ENSMUSG00190053174	pseudogene	Chr7:15744864-15745139 (-)
NZO/HlLtJ	ENSMUSG00225027364	pseudogene	Chr7:23426579-23426854 (-)
PWK/PhJ	ENSLUMG00010051630	pseudogene	Chr7:15701352-15701627 (-)
SPRET/EiJ	ENSMSPG00010051829	pseudogene	Chr7:15373393-15373668 (-)
WSB/EiJ	ENSIUOG00005053618	pseudogene	Chr7:10240526-10240801 (-)

Homology

• Gene Tree
  Gm4613
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm4613
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000090467 (Evidence)
• NCBI Gene
  100043732

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090467	Ensembl Gene Model | MGI Sequence Detail	276	C57BL/6J
transcript	ENSMUST00000165488	Ensembl | MGI Sequence Detail	276	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:190445 Wei Y, et al., Generation and Characterization of a Novel Cyp2a(4/5)bgs-Null Mouse Model. Drug Metab Dispos. 2013 Jan;41(1):132-40
• Latest
  J:345867 Li L, et al., Impact of nicotine metabolism on nicotine's pharmacological effects and behavioral responses: insights from a Cyp2a(4/5)bgs-null mouse. J Pharmacol Exp Ther. 2013 Dec;347(3):746-54