Gm4561 Pseudogene Detail

Summary

• Symbol
  Gm4561
• Name
  predicted gene 4561

• Feature Type
  pseudogene
• IDs
  MGI:3782745
  NCBI Gene: 100043630
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:70232322-70232826 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 40.82 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  190 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782745	pseudogene	Chr17:70232322-70232826 (-)
129S1/SvImJ	ENSMUSG00200039767	pseudogene	Chr17:65576844-65577348 (-)
A/J	ENSMUSG00195019954	pseudogene	Chr17:66914464-66914968 (-)
AKR/J	ENSMUSG00220019170	pseudogene	Chr17:65970371-65970875 (-)
BALB/cJ	ENSMUSG00180021929	pseudogene	Chr17:66650722-66651226 (-)
C3H/HeJ	ENSMUSG00175032465	pseudogene	Chr17:65965519-65966023 (-)
C57BL/6NJ	ENSMUSG00215033858	pseudogene	Chr17:65646614-65647118 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028096	pseudogene	Chr17:66531469-66531973 (-)
CBA/J	ENSMUSG00210031457	pseudogene	Chr17:65775953-65776457 (-)
DBA/2J	ENSMUSG00185023386	pseudogene	Chr17:68609159-68609663 (-)
FVB/NJ	ENSMUSG00205019765	pseudogene	Chr17:66419831-66420335 (-)
JF1/MsJ	ENSUMUG00000042050	pseudogene	Chr17:68280111-68280615 (-)
LP/J	ENSMUSG00230017325	pseudogene	Chr17:69592497-69593001 (-)
NOD/ShiLtJ	ENSMUSG00190039536	pseudogene	Chr17:65733559-65734063 (-)
NZO/HlLtJ	ENSMUSG00225029079	pseudogene	Chr17:71872545-71873049 (-)
PWK/PhJ	ENSLUMG00010031590	pseudogene	Chr17:65528916-65529420 (-)
SPRET/EiJ	ENSMSPG00010017948	pseudogene	Chr17:65879848-65880352 (-)
WSB/EiJ	ENSIUOG00005034136	pseudogene	Chr17:66626157-66626661 (-)

Homology

• Gene Tree
  Gm4561
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000117078 (Evidence)
• NCBI Gene
  100043630

Representative Sequences			Length	Strain/Species
genomic	100043630	NCBI Gene Model | MGI Sequence Detail	505	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;