Gm4518 Pseudogene Detail

Summary

• Symbol
  Gm4518
• Name
  predicted gene 4518

• Feature Type
  pseudogene
• IDs
  MGI:3782703
  NCBI Gene: 100043560
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:62087910-62088627 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 32.05 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  128 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782703	pseudogene	Chr17:62087673-62088627 (-)
129S1/SvImJ	ENSMUSG00200016818	pseudogene	Chr17:57388938-57389655 (-)
A/J	ENSMUSG00195007296	pseudogene	Chr17:58763788-58764505 (-)
AKR/J	ENSMUSG00220013473	pseudogene	Chr17:57836627-57837344 (-)
BALB/cJ	ENSMUSG00180006290	pseudogene	Chr17:58507784-58508501 (-)
C3H/HeJ	ENSMUSG00175007633	pseudogene	Chr17:57820071-57820788 (-)
C57BL/6NJ	ENSMUSG00215009590	pseudogene	Chr17:57462599-57463316 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019702	pseudogene	Chr17:58468206-58468923 (-)
CBA/J	ENSMUSG00210028956	pseudogene	Chr17:57612491-57613208 (-)
DBA/2J	ENSMUSG00185009483	pseudogene	Chr17:60464016-60464733 (-)
FVB/NJ	ENSMUSG00205007606	pseudogene	Chr17:58101784-58102501 (-)
JF1/MsJ	ENSUMUG00000039928	pseudogene	Chr19:10647712-10648410 (+)
JF1/MsJ	ENSUMUG00000034407	pseudogene	Chr17:60149513-60150230 (-)
LP/J	ENSMUSG00230029262	pseudogene	Chr17:61435733-61436450 (-)
NOD/ShiLtJ	ENSMUSG00190010819	pseudogene	Chr17:57596300-57597017 (-)
NZO/HlLtJ	ENSMUSG00225026303	pseudogene	Chr17:63726267-63726984 (-)
PWK/PhJ	ENSLUMG00010009585	pseudogene	Chr17:57407902-57408619 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005024193	pseudogene	Chr17:58436984-58437701 (-)

Homology

• Gene Tree
  Gm4518
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000098123 (Evidence)
• NCBI Gene
  100043560

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098123	Ensembl Gene Model | MGI Sequence Detail	718	C57BL/6J
transcript	ENSMUST00000182638	Ensembl | MGI Sequence Detail	718	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;