Gm4512 Pseudogene Detail

Summary

• Symbol
  Gm4512
• Name
  predicted gene 4512

• Feature Type
  pseudogene
• IDs
  MGI:3782697
  NCBI Gene: 100043549
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:60797537-60798048 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 31.40 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  177 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782697	pseudogene	Chr17:60797537-60798048 (+)
129S1/SvImJ	ENSMUSG00200016882	pseudogene	Chr17:56088835-56089346 (+)
A/J	ENSMUSG00195007365	pseudogene	Chr17:57473175-57473686 (+)
AKR/J	ENSMUSG00220013671	pseudogene	Chr17:56539539-56540050 (+)
BALB/cJ	ENSMUSG00180006609	pseudogene	Chr17:57217179-57217690 (+)
C3H/HeJ	ENSMUSG00175007704	pseudogene	Chr17:56517721-56518232 (+)
C57BL/6NJ	ENSMUSG00215009245	pseudogene	Chr17:56172044-56172555 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019223	pseudogene	Chr17:57174633-57175133 (+)
CBA/J	ENSMUSG00210029581	pseudogene	Chr17:56315005-56315516 (+)
DBA/2J	ENSMUSG00185009665	pseudogene	Chr17:59173478-59173989 (+)
FVB/NJ	ENSMUSG00205007364	pseudogene	Chr17:56776514-56777025 (+)
JF1/MsJ	ENSUMUG00000034952	pseudogene	Chr17:58856889-58857401 (+)
LP/J	ENSMUSG00230029401	pseudogene	Chr17:60145358-60145869 (+)
NOD/ShiLtJ	ENSMUSG00190010959	pseudogene	Chr17:56306042-56306553 (+)
NZO/HlLtJ	ENSMUSG00225026435	pseudogene	Chr17:62435737-62436248 (+)
PWK/PhJ	ENSLUMG00010009753	pseudogene	Chr17:56117750-56118262 (+)
SPRET/EiJ	ENSMSPG00010006087	pseudogene	Chr17:56448887-56449399 (+)
WSB/EiJ	ENSIUOG00005024354	pseudogene	Chr17:57148194-57148705 (+)

Homology

• Gene Tree
  Gm4512
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000117112 (Evidence)
• NCBI Gene
  100043549

Representative Sequences			Length	Strain/Species
genomic	100043549	NCBI Gene Model | MGI Sequence Detail	512	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;