Hcfc1r1-ps1 Pseudogene Detail

Summary

• Symbol
  Hcfc1r1-ps1
• Name
  host cell factor C1 regulator 1 (XPO1-dependent), pseudogene 1
• Synonyms
  Gm4458

• Feature Type
  pseudogene
• IDs
  MGI:3782642
  NCBI Gene: 100043471
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:54197618-54197963 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 28.03 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  229 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782642	pseudogene	Chr17:54197608-54197963 (-)
129S1/SvImJ	ENSMUSG00200029445	pseudogene	Chr17:49412013-49412358 (-)
A/J	ENSMUSG00195007137	pseudogene	Chr17:50864330-50864675 (-)
AKR/J	ENSMUSG00220037773	pseudogene	Chr17:49871955-49872300 (-)
BALB/cJ	ENSMUSG00180006363	pseudogene	Chr17:50620484-50620829 (-)
C3H/HeJ	ENSMUSG00175016581	pseudogene	Chr17:49927635-49927980 (-)
C57BL/6NJ	ENSMUSG00215034397	pseudogene	Chr17:49528654-49528999 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019528	pseudogene	Chr17:50756012-50756357 (-)
CBA/J	ENSMUSG00210039552	pseudogene	Chr17:49677163-49677508 (-)
DBA/2J	ENSMUSG00185009543	pseudogene	Chr17:52577727-52578072 (-)
FVB/NJ	ENSMUSG00205053268	pseudogene	Chr17:50243344-50243689 (-)
JF1/MsJ	ENSUMUG00000035637	pseudogene	Chr17:52342516-52342861 (-)
LP/J	ENSMUSG00230028956	pseudogene	Chr17:53524570-53524915 (-)
NOD/ShiLtJ	ENSMUSG00190018071	pseudogene	Chr17:49661385-49661730 (-)
NZO/HlLtJ	ENSMUSG00225043405	pseudogene	Chr17:55805206-55805551 (-)
PWK/PhJ	ENSLUMG00010036621	pseudogene	Chr17:49559316-49559661 (-)
SPRET/EiJ	ENSMSPG00010039787	pseudogene	Chr17:49769711-49769737 (-)
WSB/EiJ	ENSIUOG00005023941	pseudogene	Chr17:50611401-50611745 (-)

Homology

• Gene Tree
  Hcfc1r1-ps1
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000105235 (Evidence)
• NCBI Gene
  100043471

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105235	Ensembl Gene Model | MGI Sequence Detail	346	C57BL/6J
transcript	ENSMUST00000198911	Ensembl | MGI Sequence Detail	346	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;