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Hcfc1r1-ps1 Pseudogene Detail
Summary
  • Symbol
    Hcfc1r1-ps1
  • Name
    host cell factor C1 regulator 1 (XPO1-dependent), pseudogene 1
  • Synonyms
    Gm4458
Location &
Maps
more
  • Sequence Map
    Chr17:54197618-54197963 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 28.03 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    24 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3782642
 pseudogene Chr17:54197608-54197963 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0011371
 pseudogene Chr17:53969296-53969641 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0011352
 pseudogene Chr17:53807510-53807855 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0011642
 pseudogene Chr17:57648637-57648982 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0011047
 pseudogene Chr17:55618372-55618717 (-)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0011269
 pseudogene Chr17:52323928-52324273 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0011263
 pseudogene Chr17:59197395-59197740 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0011620
 pseudogene Chr17:54922529-54922874 (-)
PWK/PhJ MGP_PWKPhJ_G0010915
 pseudogene Chr17:52125439-52125784 (-)
SPRET/EiJ MGP_SPRETEiJ_G0010738
 pseudogene Chr17:51700658-51701009 (+)
WSB/EiJ MGP_WSBEiJ_G0011085
 pseudogene Chr17:55567716-55568060 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    14
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105235 Ensembl Gene Model | MGI Sequence Detail 346 C57BL/6J ±  kb
transcript ENSMUST00000198911 Ensembl | MGI Sequence Detail 346 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory