Gm4342 Pseudogene Detail

Summary

• Symbol
  Gm4342
• Name
  predicted gene 4342

• Feature Type
  pseudogene
• IDs
  MGI:3782526
  NCBI Gene: 100043296
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr8:124580568-124580934 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 72.23 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  22

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782526	pseudogene	Chr8:124580537-124580981 (+)
129S1/SvImJ	ENSMUSG00200043588	pseudogene	Chr8:118826602-118826968 (+)
A/J	ENSMUSG00195026762	pseudogene	Chr8:119129347-119129713 (+)
AKR/J	ENSMUSG00220044545	pseudogene	Chr8:119308226-119308592 (+)
BALB/cJ	ENSMUSG00180029714	pseudogene	Chr8:119174302-119174668 (+)
C3H/HeJ	ENSMUSG00175034464	pseudogene	Chr8:119227733-119228099 (+)
C57BL/6NJ	ENSMUSG00215035280	pseudogene	Chr8:118812303-118812669 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025861	pseudogene	Chr14:23320715-23321083 (-)
CAST/EiJ	ENSTCUG00005035574	pseudogene	Chr8:118580506-118580871 (+)
CAST/EiJ	ENSTCUG00005022504	pseudogene	Chr9:53678482-53678850 (-)
CBA/J	ENSMUSG00210038163	pseudogene	Chr8:119138294-119138660 (+)
DBA/2J	ENSMUSG00185037808	pseudogene	Chr8:125457195-125457561 (+)
FVB/NJ	ENSMUSG00205039728	pseudogene	Chr8:118120793-118121159 (+)
JF1/MsJ	ENSUMUG00000037494	pseudogene	Chr3:149472809-149473177 (+)
JF1/MsJ	ENSUMUG00000038537	pseudogene	Chr8:127681750-127682116 (+)
LP/J	ENSMUSG00230032058	pseudogene	Chr8:129009314-129009680 (+)
NOD/ShiLtJ	ENSMUSG00190021231	pseudogene	Chr8:119260757-119261123 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010039413	pseudogene	Chr8:118968950-118969316 (+)
PWK/PhJ	ENSLUMG00010002920	pseudogene	Chr1:41104759-41105127 (+)
PWK/PhJ	ENSLUMG00010002062	pseudogene	Chr3:149408023-149408391 (+)
PWK/PhJ	ENSLUMG00010005137	pseudogene	Chr10:47587029-47587397 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005030505	pseudogene	Chr8:119945801-119946167 (+)

Homology

• Gene Tree
  Gm4342
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25

• Ensembl
  ENSMUSG00000083911 (Evidence)
• NCBI Gene
  100043296

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083911	Ensembl Gene Model | MGI Sequence Detail	367	C57BL/6J
transcript	ENSMUST00000118982	Ensembl | MGI Sequence Detail	367	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm4342:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr79993	Chr8:124580530-124580533 (+)	-36 bp