Gm4287 Pseudogene Detail

Summary

• Symbol
  Gm4287
• Name
  predicted gene 4287

• Feature Type
  pseudogene
• IDs
  MGI:3782465
  NCBI Gene: 100043191
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:90212668-90213249 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 40.08 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  38 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782465	pseudogene	Chr6:90212668-90213255 (+)
129S1/SvImJ	ENSMUSG00200045845	pseudogene	Chr6:87158068-87158652 (+)
A/J	ENSMUSG00195040463	pseudogene	Chr6:86882953-86883537 (+)
AKR/J	ENSMUSG00220034660	pseudogene	Chr6:85784451-85785035 (+)
BALB/cJ	ENSMUSG00180020049	pseudogene	Chr6:87246643-87247227 (+)
C3H/HeJ	ENSMUSG00175026046	pseudogene	Chr6:90185857-90186441 (-)
C57BL/6NJ	ENSMUSG00215033653	pseudogene	Chr6:87247505-87248089 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011273	pseudogene	Chr4:48882269-48890122 (+)
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210045637	pseudogene	Chr6:87033783-87034367 (+)
DBA/2J	ENSMUSG00185047440	pseudogene	Chr6:87581143-87581727 (+)
FVB/NJ	ENSMUSG00205041719	pseudogene	Chr6:86214215-86214799 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230050810	pseudogene	Chr6:88715839-88716423 (+)
NOD/ShiLtJ	ENSMUSG00190045073	pseudogene	Chr6:86652942-86653526 (+)
NZO/HlLtJ	ENSMUSG00225019796	pseudogene	Chr6:90722287-90722871 (+)
PWK/PhJ	ENSLUMG00010036963	pseudogene	Chr6:85946564-85947148 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005035462	pseudogene	Chr6:87653158-87653742 (+)

Homology

• Gene Tree
  Gm4287
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm4287
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000092552 (Evidence)
• NCBI Gene
  100043191

Representative Sequences			Length	Strain/Species
genomic	100043191	NCBI Gene Model | MGI Sequence Detail	582	C57BL/6J

References

• Summaries
  All 10

  Phenotypes 5
• Earliest
  J:21726 Champion KM, et al., Identification of a heritable deficiency of the folate-dependent enzyme 10-formyltetrahydrofolate dehydrogenase in mice. Proc Natl Acad Sci U S A. 1994 Nov 22;91(24):11338-42
• Latest
  J:134595 Anthony TE, et al., The folate metabolic enzyme ALDH1L1 is restricted to the midline of the early CNS, suggesting a role in human neural tube defects. J Comp Neurol. 2007 Jan 10;500(2):368-83