Gm4287 Pseudogene Detail

Summary

• Symbol
  Gm4287
• Name
  predicted gene 4287

• Feature Type
  pseudogene
• IDs
  MGI:3782465
  NCBI Gene: 100043191
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:90212668-90213249 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 40.08 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  38 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782465	pseudogene	Chr6:90212668-90213255 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013594	pseudogene	Chr6:91756991-91757572 (+)
A/J	MGP_AJ_G0012732	pseudogene	Chr4:83182364-83182945 (-)
AKR/J	MGP_AKRJ_G0013537	pseudogene	Chr6:90724408-90730034 (+)
BALB/cJ	MGP_BALBcJ_G0013557	pseudogene	Chr6:88222549-88223130 (+)
C3H/HeJ	MGP_C3HHeJ_G0013381	pseudogene	Chr6:93716925-93717506 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013942	pseudogene	Chr6:94179009-94179593 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011273	pseudogene	Chr4:48882269-48890122 (+)
CAST/EiJ	MGP_CASTEiJ_G0012257	pseudogene	Chr4:53642198-53650953 (+)
CBA/J	MGP_CBAJ_G0013375	pseudogene	Chr6:97706699-97707280 (+)
DBA/2J	MGP_DBA2J_G0013455	pseudogene	Chr6:87469579-87470160 (+)
FVB/NJ	MGP_FVBNJ_G0013455	pseudogene	Chr6:86661747-86662328 (+)
LP/J	MGP_LPJ_G0013531	pseudogene	Chr6:91725527-91726108 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013467	pseudogene	Chr6:101797364-101797945 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013933	pseudogene	Chr6:90598205-90598786 (+)
PWK/PhJ	MGP_PWKPhJ_G0012902	pseudogene	Chr6:86409922-86410493 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011897	pseudogene	Chr4:52918892-52926620 (+)
WSB/EiJ	MGP_WSBEiJ_G0013146	pseudogene	Chr6:91042077-91042658 (+)

Homology

• Gene Tree
  Gm4287
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm4287
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000092552 (Evidence)
• NCBI Gene
  100043191

Representative Sequences			Length	Strain/Species
genomic	100043191	NCBI Gene Model | MGI Sequence Detail	582	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:21726 Champion KM, et al., Identification of a heritable deficiency of the folate-dependent enzyme 10-formyltetrahydrofolate dehydrogenase in mice. Proc Natl Acad Sci U S A. 1994 Nov 22;91(24):11338-42
• Latest
  J:134595 Anthony TE, et al., The folate metabolic enzyme ALDH1L1 is restricted to the midline of the early CNS, suggesting a role in human neural tube defects. J Comp Neurol. 2007 Jan 10;500(2):368-83