Gm4278 Gene Detail

Summary

• Symbol
  Gm4278
• Name
  predicted gene 4278

• Feature Type
  lncRNA gene
• IDs
  MGI:3782455
  NCBI Gene: 100043169
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:75212526-75224544 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  529 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782455	lncRNA gene	Chr14:75212526-75224544 (+)
129S1/SvImJ	ENSMUSG00200011134	lncRNA gene	Chr14:63633793-63645820 (+)
A/J	ENSMUSG00195004134	lncRNA gene	Chr14:63789093-63801111 (+)
AKR/J	ENSMUSG00220007433	lncRNA gene	Chr14:63176780-63188795 (+)
BALB/cJ	ENSMUSG00180023929	lncRNA gene	Chr14:63381158-63393175 (+)
C3H/HeJ	ENSMUSG00175031336	lncRNA gene	Chr14:65197789-65209804 (+)
C57BL/6NJ	ENSMUSG00215019869	lncRNA gene	Chr14:63376419-63388441 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032625	lncRNA gene	Chr14:65023572-65035746 (+)
CBA/J	ENSMUSG00210010260	lncRNA gene	Chr14:63812717-63824734 (+)
DBA/2J	ENSMUSG00185024279	lncRNA gene	Chr14:68957273-68969291 (+)
FVB/NJ	ENSMUSG00205028513	lncRNA gene	Chr14:63204690-63216711 (+)
JF1/MsJ	ENSUMUG00000046382	lncRNA gene	Chr14:80110881-80123073 (+)
LP/J	ENSMUSG00230017683	lncRNA gene	Chr14:80983860-80995886 (+)
NOD/ShiLtJ	ENSMUSG00190011340	lncRNA gene	Chr14:63571636-63583807 (+)
NZO/HlLtJ	ENSMUSG00225040652	lncRNA gene	Chr14:71299428-71311547 (+)
PWK/PhJ	ENSLUMG00010011272	lncRNA gene	Chr14:62975300-62987536 (+)
SPRET/EiJ	ENSMSPG00010027571	lncRNA gene	Chr14:66609612-66621485 (+)
WSB/EiJ	ENSIUOG00005023323	lncRNA gene	Chr14:62958789-62970807 (+)

Homology

• Gene Tree
  Gm4278
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm4278
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000115019 (Evidence)
• NCBI Gene
  100043169

Representative Sequences			Length	Strain/Species
genomic	100043169	NCBI Gene Model | MGI Sequence Detail	12019	C57BL/6J
transcript	NR_046078	RefSeq | MGI Sequence Detail	1456	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;