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Gm4275 Pseudogene Detail
Summary
  • Symbol
    Gm4275
  • Name
    predicted gene 4275
  • Synonyms
    Dfa
Location &
Maps
more
  • Sequence Map
    Chr7:130127249-130131231 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    43 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3782452
 pseudogene Chr7:130121321-130132810 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007286
 lincRNA gene Chr7:135048625-135051891 (+)
A/J MGP_AJ_G0007283
 lincRNA gene Chr7:131372888-131376149 (+)
AKR/J MGP_AKRJ_G0007253
 lincRNA gene Chr7:134854941-134858213 (+)
BALB/cJ MGP_BALBcJ_G0007261
 lincRNA gene Chr7:131046863-131050126 (+)
C3H/HeJ MGP_C3HHeJ_G0007205
 lincRNA gene Chr7:134726191-134729452 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007431
 lincRNA gene Chr7:140258367-140261633 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006636
 lincRNA gene Chr7:132533820-132537496 (+)
CAST/EiJ MGP_CASTEiJ_G0007107
 lincRNA gene Chr7:126537307-126540848 (+)
CBA/J MGP_CBAJ_G0007188
 lincRNA gene Chr7:145045772-145049042 (+)
DBA/2J MGP_DBA2J_G0007209
 lincRNA gene Chr7:129375657-129378925 (+)
FVB/NJ MGP_FVBNJ_G0007231
 lincRNA gene Chr7:129225231-129228500 (+)
LP/J MGP_LPJ_G0007291
 lincRNA gene Chr7:136529109-136532380 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007208
 lincRNA gene Chr7:146006640-146009850 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007434
 lincRNA gene Chr7:133791257-133794519 (+)
PWK/PhJ MGP_PWKPhJ_G0007049
 lincRNA gene Chr7:122437981-122441434 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006957
 lincRNA gene Chr7:120615400-120618660 (+)
WSB/EiJ MGP_WSBEiJ_G0007168
 lincRNA gene Chr7:134795036-134798319 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    6
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000099422 Ensembl Gene Model | MGI Sequence Detail 3983 C57BL/6J ±  kb
transcript ENSMUST00000212624 Ensembl | MGI Sequence Detail 1436 Not Applicable  
polypeptide XP_006508493 RefSeq | MGI Sequence Detail 361 C57BL/6J  
For the selected sequence
References
more
  • Summaries
    All 5
    Gene Ontology 1
  • Earliest
    J:163886 Brower CS, et al., Mouse Dfa is a repressor of TATA-box promoters and interacts with the Abt1 activator of basal transcription. J Biol Chem. 2010 May 28;285(22):17218-34
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory