Gm4248 Pseudogene Detail

Summary

• Symbol
  Gm4248
• Name
  predicted pseudogene 4248

• Feature Type
  pseudogene
• IDs
  MGI:3782425
  NCBI Gene: 100043129
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:105998350-105998665 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 46.49 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  81 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782425	pseudogene	Chr3:105998257-105998865 (+)
129S1/SvImJ	ENSMUSG00200035635	pseudogene	Chr3:102598115-102598430 (+)
A/J	ENSMUSG00195025490	pseudogene	Chr3:103028009-103028324 (+)
AKR/J	ENSMUSG00220032885	pseudogene	Chr3:101389876-101390191 (+)
BALB/cJ	ENSMUSG00180018813	pseudogene	Chr3:102976465-102976780 (+)
C3H/HeJ	ENSMUSG00175030055	pseudogene	Chr3:102508248-102508563 (+)
C57BL/6NJ	ENSMUSG00215030497	pseudogene	Chr3:103271074-103271389 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011004	pseudogene	Chr3:100107495-100107812 (+)
CAST/EiJ	ENSTCUG00005027114	pseudogene	Chr3:103230401-103230716 (+)
CBA/J	ENSMUSG00210008985	pseudogene	Chr3:103130194-103130509 (+)
DBA/2J	ENSMUSG00185022097	pseudogene	Chr3:103604361-103604676 (+)
FVB/NJ	ENSMUSG00205033906	pseudogene	Chr3:102174803-102175118 (+)
JF1/MsJ	ENSUMUG00000005143	pseudogene	Chr3:102311298-102311613 (+)
LP/J	ENSMUSG00230020004	pseudogene	Chr3:105526000-105526315 (+)
NOD/ShiLtJ	ENSMUSG00190038903	pseudogene	Chr3:103835184-103835499 (+)
NZO/HlLtJ	ENSMUSG00225020854	pseudogene	Chr3:108009092-108009407 (+)
PWK/PhJ	ENSLUMG00010032265	pseudogene	Chr3:102421977-102422292 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005004633	pseudogene	Chr3:103148940-103149255 (+)

Homology

• Gene Tree
  Gm4248
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm4248
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000105051 (Evidence)
• NCBI Gene
  100043129

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105051	Ensembl Gene Model | MGI Sequence Detail	316	C57BL/6J
transcript	ENSMUST00000196905	Ensembl | MGI Sequence Detail	316	Not Applicable

References

• Summaries
  All 9

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426