Gm4189 Gene Detail

Summary

• Symbol
  Gm4189
• Name
  predicted gene 4189

• Feature Type
  lncRNA gene
• IDs
  MGI:3782365
  NCBI Gene: 100043045
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:127125562-127127895 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 74.50 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  77 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782365	lncRNA gene	Chr10:127125562-127127895 (-)
129S1/SvImJ	ENSMUSG00200013533	lncRNA gene	Chr10:123478538-123479631 (-)
A/J	ENSMUSG00195018106	lncRNA gene	Chr10:123942674-123943767 (-)
AKR/J	ENSMUSG00220006515	lncRNA gene	Chr10:123547153-123548246 (-)
BALB/cJ	ENSMUSG00180011464	lncRNA gene	Chr10:123933738-123934831 (-)
C3H/HeJ	ENSMUSG00175006282	lncRNA gene	Chr10:123932428-123933521 (-)
C57BL/6NJ	ENSMUSG00215024708	lncRNA gene	Chr10:123543748-123544841 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013283	unclassified non-coding RNA gene	Chr10:119643895-119644993 (-)
CAST/EiJ	ENSTCUG00005042097	lncRNA gene	Chr10:122911815-122912908 (-)
CBA/J	ENSMUSG00210009302	lncRNA gene	Chr10:123756622-123757715 (-)
DBA/2J	ENSMUSG00185027831	lncRNA gene	Chr10:123908733-123909825 (-)
FVB/NJ	ENSMUSG00205026483	lncRNA gene	Chr10:123153317-123154410 (-)
JF1/MsJ	ENSUMUG00000045920	lncRNA gene	Chr10:125204133-125205225 (-)
LP/J	ENSMUSG00230033696	lncRNA gene	Chr10:125825774-125826866 (-)
NOD/ShiLtJ	ENSMUSG00190016608	lncRNA gene	Chr10:123975796-123976888 (-)
NZO/HlLtJ	ENSMUSG00225037566	lncRNA gene	Chr10:130026418-130027511 (-)
PWK/PhJ	ENSLUMG00010010428	lncRNA gene	Chr10:123664344-123665436 (-)
SPRET/EiJ	ENSMSPG00010039062	lncRNA gene	Chr10:125614600-125615693 (-)
WSB/EiJ	ENSIUOG00005008997	lncRNA gene	Chr10:123542931-123544023 (-)

Homology

• Gene Tree
  Gm4189
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  4
• Gene trapped
  4
• Find Mice (IMSR)
  6 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29

• Ensembl
  ENSMUSG00000092384 (Evidence)
• NCBI Gene
  100043045

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092384	Ensembl Gene Model | MGI Sequence Detail	2334	C57BL/6J
transcript	ENSMUST00000269433	Ensembl | MGI Sequence Detail	1043	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9