Gm4107 Gene Detail

Summary

• Symbol
  Gm4107
• Name
  predicted gene 4107

• Feature Type
  lncRNA gene
• IDs
  MGI:3782283
  NCBI Gene: 100042916
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:46484325-46560195 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2261 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782283	lncRNA gene	Chr18:46484325-46624115 (-)
129S1/SvImJ	ENSMUSG00200030862	lncRNA gene	Chr18:43515269-43584503 (-)
A/J	ENSMUSG00195025126	lncRNA gene	Chr18:43693755-43762994 (-)
AKR/J	ENSMUSG00220021200	lncRNA gene	Chr18:43643539-43712868 (-)
BALB/cJ	ENSMUSG00180007996	lncRNA gene	Chr18:44183065-44252251 (-)
C3H/HeJ	ENSMUSG00175011189	lncRNA gene	Chr18:43700989-43770167 (-)
C57BL/6NJ	ENSMUSG00215009738	lncRNA gene	Chr18:43376041-43445299 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014431	lncRNA gene	Chr18:43125842-43199116 (-)
CBA/J	ENSMUSG00210022521	lncRNA gene	Chr18:43752842-43822017 (-)
DBA/2J	ENSMUSG00185028459	lncRNA gene	Chr18:43652971-43722143 (-)
FVB/NJ	ENSMUSG00205016159	lncRNA gene	Chr18:43123871-43193084 (-)
JF1/MsJ	ENSUMUG00000032104	lncRNA gene	Chr18:43674388-43747431 (-)
LP/J	ENSMUSG00230030074	lncRNA gene	Chr18:45726773-45795994 (-)
NOD/ShiLtJ	ENSMUSG00190029654	lncRNA gene	Chr18:43428398-43497622 (-)
NZO/HlLtJ	ENSMUSG00225027624	lncRNA gene	Chr18:45592815-45662058 (-)
PWK/PhJ	ENSLUMG00010022256	lncRNA gene	Chr18:43777263-43848826 (-)
SPRET/EiJ	ENSMSPG00010013643	lncRNA gene	Chr18:43944817-44017513 (-)
WSB/EiJ	ENSIUOG00005009456	lncRNA gene	Chr18:43349237-43426583 (-)

Homology

• Gene Tree
  Gm4107
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm4107
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  1

• Ensembl
  ENSMUSG00000118002 (Evidence)
• NCBI Gene
  100042916

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118002	Ensembl Gene Model | MGI Sequence Detail	75871	C57BL/6J
transcript	ENSMUST00000312348	Ensembl | MGI Sequence Detail	1234	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:327181 Lewis MA, et al., Identification and characterisation of spontaneous mutations causing deafness from a targeted knockout programme. BMC Biol. 2022 Mar 17;20(1):67