Gm4083 Pseudogene Detail

Summary

• Symbol
  Gm4083
• Name
  predicted gene 4083

• Feature Type
  pseudogene
• IDs
  MGI:3782258
  NCBI Gene: 100042871
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:118900480-118900930 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 63.82 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  146 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782258	pseudogene	Chr7:118900475-118900930 (-)
129S1/SvImJ	ENSMUSG00200022350	pseudogene	Chr7:105410884-105411334 (-)
A/J	ENSMUSG00195039740	pseudogene	Chr7:109950165-109950611 (-)
AKR/J	ENSMUSG00220030290	pseudogene	Chr7:103378685-103379135 (-)
BALB/cJ	ENSMUSG00180033202	pseudogene	Chr7:106613409-106613855 (-)
C3H/HeJ	ENSMUSG00175025788	pseudogene	Chr7:107325304-107325756 (-)
C57BL/6NJ	ENSMUSG00215040840	pseudogene	Chr7:106569105-106569555 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045093	pseudogene	Chr7:109911106-109911558 (-)
CBA/J	ENSMUSG00210025048	pseudogene	Chr7:107047874-107048326 (-)
DBA/2J	ENSMUSG00185050718	pseudogene	Chr7:111398844-111399296 (-)
FVB/NJ	ENSMUSG00205049744	pseudogene	Chr7:107037002-107037452 (-)
JF1/MsJ	ENSUMUG00000052756	pseudogene	Chr7:116460870-116461322 (-)
LP/J	ENSMUSG00230038326	pseudogene	Chr7:117496713-117497163 (-)
NOD/ShiLtJ	ENSMUSG00190030914	pseudogene	Chr7:107248715-107249165 (-)
NZO/HlLtJ	ENSMUSG00225040578	pseudogene	Chr7:115757024-115757470 (-)
PWK/PhJ	ENSLUMG00010013251	pseudogene	Chr7:105592730-105593182 (-)
SPRET/EiJ	ENSMSPG00010009430	pseudogene	Chr7:106799540-106799988 (-)
WSB/EiJ	ENSIUOG00005012123	pseudogene	Chr7:107928961-107929411 (-)

Homology

• Gene Tree
  Gm4083
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000108921 (Evidence)
• NCBI Gene
  100042871

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108921	Ensembl Gene Model | MGI Sequence Detail	451	C57BL/6J
transcript	ENSMUST00000207158	Ensembl | MGI Sequence Detail	451	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;