Gm4065 Gene Detail

Summary

• Symbol
  Gm4065
• Name
  predicted gene 4065

• Feature Type
  lncRNA gene
• IDs
  MGI:3782240
  NCBI Gene: 100042850
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:118639624-118641879 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  254 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782240	lncRNA gene	Chr10:118639624-118641879 (-)
129S1/SvImJ	ENSMUSG00200026516	lncRNA gene	Chr10:114989707-114991278 (-)
A/J	ENSMUSG00195022164	lncRNA gene	Chr10:115397145-115398716 (-)
AKR/J	ENSMUSG00220014928	lncRNA gene	Chr10:115015930-115017501 (-)
BALB/cJ	ENSMUSG00180018276	lncRNA gene	Chr10:115409948-115411519 (-)
C3H/HeJ	ENSMUSG00175025194	lncRNA gene	Chr10:115401574-115403145 (-)
C57BL/6NJ	ENSMUSG00215016126	lncRNA gene	Chr10:115047860-115049431 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033398	lncRNA gene	Chr10:114386330-114387896 (-)
CBA/J	ENSMUSG00210021361	lncRNA gene	Chr10:115244089-115245660 (-)
DBA/2J	ENSMUSG00185009009	lncRNA gene	Chr10:115361261-115362832 (-)
FVB/NJ	ENSMUSG00205025312	lncRNA gene	Chr10:114655970-114657539 (-)
JF1/MsJ	ENSUMUG00000026588	lncRNA gene	Chr10:116629123-116630694 (-)
LP/J	ENSMUSG00230025726	lncRNA gene	Chr10:117316932-117318501 (-)
NOD/ShiLtJ	ENSMUSG00190019620	lncRNA gene	Chr10:115457231-115458802 (-)
NZO/HlLtJ	ENSMUSG00225019267	lncRNA gene	Chr10:121564339-121565908 (-)
PWK/PhJ	ENSLUMG00010013943	lncRNA gene	Chr10:115031827-115033398 (-)
SPRET/EiJ	ENSMSPG00010016038	lncRNA gene	Chr10:116947262-116948808 (-)
WSB/EiJ	ENSIUOG00005014551	lncRNA gene	Chr10:115081618-115083189 (-)

Homology

• Gene Tree
  Gm4065
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm4065
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000112198 (Evidence)
• NCBI Gene
  100042850

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112198	Ensembl Gene Model | MGI Sequence Detail	2256	C57BL/6J
transcript	ENSMUST00000288419	Ensembl | MGI Sequence Detail	1144	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 11

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87