Btf3-ps18 Pseudogene Detail

Summary

• Symbol
  Btf3-ps18
• Name
  basic transcription factor 3, pseudogene 18
• Synonyms
  Gm4032

• Feature Type
  pseudogene
• IDs
  MGI:3782206
  NCBI Gene: 102635341
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:56903178-56903664 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 28.37 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  86 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782206	pseudogene	Chr14:56903058-56905274 (-)
129S1/SvImJ	ENSMUSG00200044893	pseudogene	Chr14:45487847-45490370 (-)
A/J	ENSMUSG00195035293	pseudogene	Chr14:45703076-45705600 (-)
AKR/J	ENSMUSG00220033201	pseudogene	Chr14:45029865-45032388 (-)
BALB/cJ	ENSMUSG00180053101	pseudogene	Chr14:45325107-45327630 (-)
C3H/HeJ	ENSMUSG00175052500	pseudogene	Chr14:47013847-47016369 (-)
C57BL/6NJ	ENSMUSG00215049750	pseudogene	Chr14:45221976-45224499 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005049930	pseudogene	Chr14:47001381-47003913 (-)
CBA/J	ENSMUSG00210048579	pseudogene	Chr14:45693557-45696080 (-)
DBA/2J	ENSMUSG00185032918	pseudogene	Chr14:50810131-50812653 (-)
FVB/NJ	ENSMUSG00205048347	pseudogene	Chr14:45097167-45099690 (-)
JF1/MsJ	ENSUMUG00000048480	pseudogene	Chr14:61971960-61974487 (-)
LP/J	ENSMUSG00230053369	pseudogene	Chr14:62856902-62859425 (-)
NOD/ShiLtJ	ENSMUSG00190051900	pseudogene	Chr14:45459878-45462402 (-)
NZO/HlLtJ	ENSMUSG00225046870	pseudogene	Chr14:53147509-53150144 (-)
PWK/PhJ	ENSLUMG00010049352	pseudogene	Chr14:44916778-44919300 (-)
SPRET/EiJ	ENSMSPG00010048483	pseudogene	Chr14:48413542-48416176 (-)
WSB/EiJ	ENSIUOG00005047601	pseudogene	Chr14:44875415-44878035 (-)

Homology

• Gene Tree
  Btf3-ps18
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Btf3-ps18
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000110165 (Evidence)
• NCBI Gene
  102635341

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110165	Ensembl Gene Model | MGI Sequence Detail	487	C57BL/6J
transcript	ENSMUST00000210886	Ensembl | MGI Sequence Detail	487	Not Applicable

Other
Accession IDs

MGI:6450960

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;