Gm3890 Pseudogene Detail

Summary

• Symbol
  Gm3890
• Name
  predicted gene 3890

• Feature Type
  pseudogene
• IDs
  MGI:3782063
  NCBI Gene: 100042534
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:9863623-9863829 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 5.42 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  152 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782063	pseudogene	Chr16:9863621-9863879 (-)
129S1/SvImJ	ENSMUSG00200012362	pseudogene	Chr16:6854072-6854278 (-)
A/J	ENSMUSG00195012072	pseudogene	Chr16:6408008-6408214 (-)
AKR/J	ENSMUSG00220017727	pseudogene	Chr16:6696794-6697000 (-)
BALB/cJ	ENSMUSG00180008928	pseudogene	Chr16:6647675-6647881 (-)
C3H/HeJ	ENSMUSG00175030189	pseudogene	Chr16:6838704-6838910 (-)
C57BL/6NJ	ENSMUSG00215026021	pseudogene	Chr16:6512868-6513074 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010064	pseudogene	Chr16:6587474-6587680 (-)
CAST/EiJ	ENSTCUG00005032245	pseudogene	Chr16:6749753-6749959 (-)
CBA/J	ENSMUSG00210012247	pseudogene	Chr16:6855934-6856140 (-)
DBA/2J	ENSMUSG00185010283	pseudogene	Chr16:6801205-6801411 (-)
FVB/NJ	ENSMUSG00205013607	pseudogene	Chr16:6718142-6718348 (-)
JF1/MsJ	ENSUMUG00000037952	pseudogene	Chr16:6902314-6902520 (-)
LP/J	ENSMUSG00230012794	pseudogene	Chr16:9352619-9352825 (-)
NOD/ShiLtJ	ENSMUSG00190028216	pseudogene	Chr16:6899944-6900150 (-)
NZO/HlLtJ	ENSMUSG00225032532	pseudogene	Chr16:12584260-12584466 (-)
PWK/PhJ	ENSLUMG00010017818	pseudogene	Chr16:6739023-6739229 (-)
SPRET/EiJ	ENSMSPG00010018509	pseudogene	Chr16:6721366-6721572 (-)
WSB/EiJ	ENSIUOG00005016675	pseudogene	Chr16:6839511-6839717 (-)

Homology

• Gene Tree
  Gm3890
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000098170 (Evidence)
• NCBI Gene
  100042534

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098170	Ensembl Gene Model | MGI Sequence Detail	207	C57BL/6J
transcript	ENSMUST00000182416	Ensembl | MGI Sequence Detail	207	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;