Mnd1-ps Pseudogene Detail

Summary

• Symbol
  Mnd1-ps
• Name
  Mnd1 retrotransposed pseudogene
• Synonyms
  Gm3833

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3782005
  NCBI Gene: 100042415
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr14:12582905-12585678 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 5.78 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  219 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782005	pseudogene	Chr14:12582905-12585678 (-)
129S1/SvImJ	ENSMUSG00200025271	pseudogene	Chr14:9261553-9264383 (-)
A/J	ENSMUSG00195030371	pseudogene	Chr14:10090548-10093121 (-)
AKR/J	ENSMUSG00220024024	pseudogene	Chr14:9239054-9241627 (-)
BALB/cJ	ENSMUSG00180024242	pseudogene	Chr14:9382286-9384859 (-)
C3H/HeJ	ENSMUSG00175009671	pseudogene	Chr14:9429240-9431813 (-)
C57BL/6NJ	ENSMUSG00215022620	pseudogene	Chr14:9630431-9633004 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012400	pseudogene	Chr9:54541853-54542517 (+)
CAST/EiJ	ENSTCUG00005031273	pseudogene	Chr14:9290524-9291462 (+)
CBA/J	ENSMUSG00210036704	pseudogene	Chr14:9649814-9652387 (-)
DBA/2J	ENSMUSG00185038436	pseudogene	Chr14:9658295-9660868 (-)
FVB/NJ	ENSMUSG00205024816	pseudogene	Chr14:9587608-9590181 (-)
JF1/MsJ	ENSUMUG00000028117	pseudogene	Chr14:9654196-9657026 (-)
LP/J	ENSMUSG00230007264	pseudogene	Chr14:10761050-10763880 (-)
NOD/ShiLtJ	ENSMUSG00190032798	pseudogene	Chr14:9667078-9669651 (-)
NZO/HlLtJ	ENSMUSG00225037574	pseudogene	Chr14:10050565-10053138 (-)
PWK/PhJ	ENSLUMG00010032424	pseudogene	Chr14:30950406-30953298 (-)
SPRET/EiJ	ENSMSPG00010002482	pseudogene	Chr14:10006478-10009055 (-)
WSB/EiJ	ENSIUOG00005025334	pseudogene	Chr14:9496108-9498681 (-)

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000089686 (Evidence), ENSMUSG00000121680 (Evidence)
• NCBI Gene
  100042415

Representative Sequences			Length	Strain/Species
genomic	100042415	NCBI Gene Model | MGI Sequence Detail	2774	C57BL/6J
transcript	NR_030680	RefSeq | MGI Sequence Detail	2774	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Mnd1-ps:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr124255	Chr14:12583777-12583814 (-)	1,882 bp