Gm3791 Pseudogene Detail

Summary

• Symbol
  Gm3791
• Name
  predicted gene 3791

• Feature Type
  pseudogene
• IDs
  MGI:3781964
  NCBI Gene: 100042325
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:83921889-83922656 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 38.93 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781964	pseudogene	Chr12:83921724-83922680 (-)
129S1/SvImJ	ENSMUSG00200051715	pseudogene	Chr12:75929337-75930104 (-)
A/J	ENSMUSG00195034153	pseudogene	Chr12:78546961-78547728 (-)
AKR/J	ENSMUSG00220049627	pseudogene	Chr12:76342367-76343134 (-)
BALB/cJ	ENSMUSG00180023923	pseudogene	Chr12:77590924-77591691 (-)
C3H/HeJ	ENSMUSG00175046134	pseudogene	Chr12:80678809-80679576 (-)
C57BL/6NJ	ENSMUSG00215046406	pseudogene	Chr12:76896484-76897251 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034320	pseudogene	Chr12:76842050-76842817 (-)
CBA/J	ENSMUSG00210048186	pseudogene	Chr12:77093015-77093782 (-)
DBA/2J	ENSMUSG00185044710	pseudogene	Chr12:78949526-78950293 (-)
FVB/NJ	ENSMUSG00205041299	pseudogene	Chr12:76760433-76761200 (-)
JF1/MsJ	ENSUMUG00000047704	pseudogene	Chr12:82946019-82946786 (-)
LP/J	ENSMUSG00230046881	pseudogene	Chr12:86012056-86012823 (-)
NOD/ShiLtJ	ENSMUSG00190047613	pseudogene	Chr12:76149406-76150173 (-)
NZO/HlLtJ	ENSMUSG00225053273	pseudogene	Chr12:88052300-88053067 (-)
PWK/PhJ	ENSLUMG00010028710	pseudogene	Chr12:76954577-76955344 (-)
SPRET/EiJ	ENSMSPG00010020724	pseudogene	Chr12:78764729-78765496 (-)
WSB/EiJ	ENSIUOG00005046700	pseudogene	Chr12:76786822-76787589 (-)

Homology

• Gene Tree
  Gm3791
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm3791
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000113423 (Evidence)
• NCBI Gene
  100042325

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113423	Ensembl Gene Model | MGI Sequence Detail	768	C57BL/6J
transcript	ENSMUST00000220790	Ensembl | MGI Sequence Detail	768	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;