Gm3785 Pseudogene Detail

Summary

• Symbol
  Gm3785
• Name
  predicted gene 3785

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3781958
  NCBI Gene: 102633809
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:65273692-65273893 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 34.33 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  160 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781958	pseudogene	Chr13:65273690-65274130 (+)
129S1/SvImJ	ENSMUSG00200014321	pseudogene	Chr13:61378518-61378719 (+)
A/J	ENSMUSG00195030956	pseudogene	Chr13:61541824-61542025 (+)
AKR/J	ENSMUSG00220037099	pseudogene	Chr13:60623738-60623939 (+)
BALB/cJ	ENSMUSG00180025411	pseudogene	Chr13:61841310-61841511 (+)
C3H/HeJ	ENSMUSG00175008366	pseudogene	Chr13:61668874-61669075 (+)
C57BL/6NJ	ENSMUSG00215012058	pseudogene	Chr13:61685414-61685615 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012056	pseudogene	Chr13:62019719-62019920 (+)
CBA/J	ENSMUSG00210009235	pseudogene	Chr13:61868328-61868529 (+)
DBA/2J	ENSMUSG00185009001	pseudogene	Chr13:62699216-62699417 (+)
FVB/NJ	ENSMUSG00205029537	pseudogene	Chr13:60851239-60851440 (+)
JF1/MsJ	ENSUMUG00000034084	pseudogene	Chr13:62344062-62344263 (+)
LP/J	ENSMUSG00230034507	pseudogene	Chr13:72035613-72035814 (+)
NOD/ShiLtJ	ENSMUSG00190039640	pseudogene	Chr13:61608583-61608784 (+)
NZO/HlLtJ	ENSMUSG00225047360	pseudogene	Chr13:65759968-65760169 (+)
PWK/PhJ	ENSLUMG00010013380	pseudogene	Chr13:61151497-61151698 (+)
SPRET/EiJ	ENSMSPG00010033293	pseudogene	Chr2:166691882-166692077 (-)
SPRET/EiJ	ENSMSPG00010031257	pseudogene	Chr13:61412549-61412748 (+)
WSB/EiJ	ENSIUOG00005023363	pseudogene	Chr13:60320532-60320733 (+)

Homology

• Gene Tree
  Gm3785
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm3785
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  2

• Ensembl
  ENSMUSG00000114162 (Evidence)
• NCBI Gene
  102633809

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114162	Ensembl Gene Model | MGI Sequence Detail	202	C57BL/6J
transcript	ENSMUST00000221000	Ensembl | MGI Sequence Detail	202	Not Applicable
polypeptide	NP_001423245	RefSeq | MGI Sequence Detail	68	C57BL/6

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69