Gm3695 Pseudogene Detail

Summary

• Symbol
  Gm3695
• Name
  predicted gene 3695

• Feature Type
  pseudogene
• IDs
  MGI:3781871
  NCBI Gene: 100042148
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr12:81418987-81419995 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 37.61 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  24 from dbSNP Build 142
• Strain Annotations
  25

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781871	pseudogene	Chr12:81418771-81420013 (-)
129S1/SvImJ	ENSMUSG00200051699	pseudogene	Chr12:73389220-73390228 (-)
A/J	ENSMUSG00195034760	pseudogene	Chr12:76082854-76083862 (-)
A/J	ENSMUSG00195051041	pseudogene	Chr12:110370567-110371571 (+)
A/J	ENSMUSG00195051053	pseudogene	Chr12:110403597-110404604 (+)
AKR/J	ENSMUSG00220050114	pseudogene	Chr12:73878223-73879231 (-)
BALB/cJ	ENSMUSG00180025233	pseudogene	Chr12:75053491-75054499 (-)
C3H/HeJ	ENSMUSG00175046227	pseudogene	Chr12:78214960-78215968 (-)
C57BL/6NJ	ENSMUSG00215046127	pseudogene	Chr12:74419024-74420032 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034188	pseudogene	Chr12:74345959-74346967 (-)
CBA/J	ENSMUSG00210047721	pseudogene	Chr12:74629181-74630189 (-)
DBA/2J	ENSMUSG00185043923	pseudogene	Chr12:76490000-76491008 (-)
FVB/NJ	ENSMUSG00205042453	pseudogene	Chr12:74229157-74230165 (-)
JF1/MsJ	ENSUMUG00000024434	pseudogene	Chr12:80479879-80480887 (-)
LP/J	ENSMUSG00230046048	pseudogene	Chr12:83507231-83508239 (-)
NOD/ShiLtJ	ENSMUSG00190049130	pseudogene	Chr12:73684783-73685791 (-)
NZO/HlLtJ	ENSMUSG00225052007	pseudogene	Chr12:85560704-85561712 (-)
PWK/PhJ	ENSLUMG00010029450	pseudogene	Chr12:74479601-74480609 (-)
SPRET/EiJ	ENSMSPG00010032725	pseudogene	Chr2:3145747-3146754 (+)
SPRET/EiJ	ENSMSPG00010026914	pseudogene	Chr4:30664245-30665252 (-)
SPRET/EiJ	ENSMSPG00010016022	pseudogene	Chr4:90104141-90105148 (+)
SPRET/EiJ	ENSMSPG00010051294	pseudogene	Chr17:24420441-24421448 (-)
SPRET/EiJ	ENSMSPG00010000930	pseudogene	Chr1:22141798-22142799 (-)
SPRET/EiJ	ENSMSPG00010019938	pseudogene	Chr12:76318343-76319351 (-)
WSB/EiJ	ENSIUOG00005045909	pseudogene	Chr12:74301349-74302357 (-)

Homology

• Gene Tree
  Gm3695
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm3695
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  1

• Ensembl
  ENSMUSG00000067224 (Evidence)
• NCBI Gene
  100042148

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000067224	Ensembl Gene Model | MGI Sequence Detail	1009	C57BL/6J
transcript	ENSMUST00000087222	Ensembl | MGI Sequence Detail	1009	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm3695:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr116919	Chr12:81420066-81420067 (-)	-72 bp