Gm3489 Pseudogene Detail

Summary

• Symbol
  Gm3489
• Name
  predicted gene 3489

• Feature Type
  pseudogene
• IDs
  MGI:3781666
  NCBI Gene: 100041738
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:44878331-44878858 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 23.63 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781666	pseudogene	Chr1:44849573-44878858 (+)
129S1/SvImJ	ENSMUSG00200002322	pseudogene	Chr1:42502802-42503329 (+)
A/J	ENSMUSG00195002238	pseudogene	Chr1:42232918-42233445 (+)
AKR/J	ENSMUSG00220003910	pseudogene	Chr1:42186549-42187076 (+)
BALB/cJ	ENSMUSG00180003166	pseudogene	Chr1:42224501-42225028 (+)
C3H/HeJ	ENSMUSG00175000127	pseudogene	Chr1:42268114-42268641 (+)
C57BL/6NJ	ENSMUSG00215003086	pseudogene	Chr1:42202863-42203390 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009083	pseudogene	Chr1:39295635-39296115 (+)
CAST/EiJ	ENSTCUG00005000972	pseudogene	Chr1:42235058-42235585 (+)
CBA/J	ENSMUSG00210029762	pseudogene	Chr1:41946168-41946695 (+)
DBA/2J	ENSMUSG00185031809	pseudogene	Chr1:43087550-43088077 (+)
FVB/NJ	ENSMUSG00205003971	pseudogene	Chr1:42125672-42125727 (+)
JF1/MsJ	ENSUMUG00000002278	pseudogene	Chr1:42195682-42196209 (+)
LP/J	ENSMUSG00230001269	pseudogene	Chr1:43110029-43110556 (+)
NOD/ShiLtJ	ENSMUSG00190002714	pseudogene	Chr1:42157812-42158339 (+)
NZO/HlLtJ	ENSMUSG00225000919	pseudogene	Chr1:46345122-46345649 (+)
PWK/PhJ	ENSLUMG00010002904	pseudogene	Chr1:41728710-41729237 (+)
SPRET/EiJ	ENSMSPG00010013462	pseudogene	Chr1:43423904-43424429 (+)
WSB/EiJ	ENSIUOG00005003922	pseudogene	Chr1:42089204-42089731 (+)

Homology

• Gene Tree
  Gm3489
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm3489
• Find Mice (IMSR)
  6 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000100434 (Evidence)
• NCBI Gene
  100041738

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100434	Ensembl Gene Model | MGI Sequence Detail	528	C57BL/6J
transcript	ENSMUST00000190083	Ensembl | MGI Sequence Detail	528	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;