Gm3433 Pseudogene Detail

Summary

• Symbol
  Gm3433
• Name
  predicted gene 3433

• Feature Type
  pseudogene
• IDs
  MGI:3781611
  NCBI Gene: 100041616
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:37571020-37573981 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 23.31 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  366 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781611	pseudogene	Chr8:37570967-37577287 (+)
129S1/SvImJ	ENSMUSG00200007819	pseudogene	Chr8:32702248-32705621 (+)
A/J	ENSMUSG00195006229	pseudogene	Chr8:33183005-33186379 (+)
AKR/J	ENSMUSG00220006030	pseudogene	Chr8:32946921-32950295 (+)
BALB/cJ	ENSMUSG00180003404	pseudogene	Chr8:32726261-32729635 (+)
C3H/HeJ	ENSMUSG00175015416	pseudogene	Chr8:32888639-32892016 (+)
C57BL/6NJ	ENSMUSG00215009730	pseudogene	Chr8:32640574-32643535 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005622	pseudogene	Chr8:32825616-32860623 (+)
CBA/J	ENSMUSG00210012860	pseudogene	Chr8:32711660-32715032 (+)
DBA/2J	ENSMUSG00185002268	pseudogene	Chr8:38637881-38641254 (+)
FVB/NJ	ENSMUSG00205002327	pseudogene	Chr8:31923042-31926416 (+)
JF1/MsJ	ENSUMUG00000014619	pseudogene	Chr8:40321415-40324376 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190016208	pseudogene	Chr8:32760104-32763477 (+)
NZO/HlLtJ	ENSMUSG00225015091	pseudogene	Chr8:45889954-45893327 (+)
PWK/PhJ	ENSLUMG00010013335	pseudogene	Chr8:32570857-32573821 (+)
SPRET/EiJ	ENSMSPG00010004664	pseudogene	Chr8:33296517-33299466 (+)
WSB/EiJ	ENSIUOG00005006068	pseudogene	Chr8:33521297-33524661 (+)

Homology

• Gene Tree
  Gm3433
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000110337 (Evidence)
• NCBI Gene
  100041616

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110337	Ensembl Gene Model | MGI Sequence Detail	2962	C57BL/6J
transcript	ENSMUST00000210149	Ensembl | MGI Sequence Detail	1058	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;