Gm3372 Pseudogene Detail

Summary

• Symbol
  Gm3372
• Name
  predicted gene 3372

• Feature Type
  pseudogene
• IDs
  MGI:3781550
  NCBI Gene: 100041498
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:60831660-60833451 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 31.87 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  268 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781550	pseudogene	Chr5:60831637-60833454 (+)
129S1/SvImJ	ENSMUSG00200000189	pseudogene	Chr5:56446092-56447883 (+)
A/J	ENSMUSG00195000470	pseudogene	Chr5:55797975-55799767 (+)
AKR/J	ENSMUSG00220007140	pseudogene	Chr5:55914196-55915988 (+)
BALB/cJ	ENSMUSG00180006581	pseudogene	Chr5:55555510-55557302 (+)
C3H/HeJ	ENSMUSG00175001756	pseudogene	Chr5:57573778-57575570 (+)
C57BL/6NJ	ENSMUSG00215002838	pseudogene	Chr5:56345891-56347682 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009345	pseudogene	Chr1:156785944-156787409 (-)
CAST/EiJ	ENSTCUG00005000510	pseudogene	Chr5:55532805-55534596 (+)
CBA/J	ENSMUSG00210000271	pseudogene	Chr5:56523621-56525413 (+)
DBA/2J	ENSMUSG00185000201	pseudogene	Chr5:58371782-58373574 (+)
FVB/NJ	ENSMUSG00205011256	pseudogene	Chr5:55327792-55329584 (+)
JF1/MsJ	ENSUMUG00000024545	pseudogene	Chr5:62874774-62876563 (+)
LP/J	ENSMUSG00230008844	pseudogene	Chr5:63060121-63061912 (+)
NOD/ShiLtJ	ENSMUSG00190000603	pseudogene	Chr5:55499280-55501072 (+)
NZO/HlLtJ	ENSMUSG00225002490	pseudogene	Chr5:68182077-68183868 (+)
PWK/PhJ	ENSLUMG00010004312	pseudogene	Chr5:55493146-55494935 (+)
SPRET/EiJ	ENSMSPG00010003998	pseudogene	Chr5:57215080-57215645 (+)
WSB/EiJ	ENSIUOG00005000134	pseudogene	Chr5:58452897-58454689 (+)

Homology

• Gene Tree
  Gm3372
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm3372
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000105486 (Evidence)
• NCBI Gene
  100041498

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105486	Ensembl Gene Model | MGI Sequence Detail	1792	C57BL/6J
transcript	ENSMUST00000198806	Ensembl | MGI Sequence Detail	1792	Not Applicable

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17