Gm3333 Pseudogene Detail

Summary

• Symbol
  Gm3333
• Name
  predicted gene 3333

• Feature Type
  pseudogene
• IDs
  MGI:3781511
  NCBI Gene: 100041430
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:62421561-62423055 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 32.74 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  79 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781511	pseudogene	Chr13:62420575-62423067 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195046225	pseudogene	Chr13:58679810-58691488 (+)
AKR/J	ENSMUSG00220044761	pseudogene	Chr13:57993997-58005688 (-)
BALB/cJ	ENSMUSG00180018564	pseudogene	Chr13:59029108-59040789 (+)
C3H/HeJ	ENSMUSG00175042089	pseudogene	Chr13:58819138-58830826 (+)
C57BL/6NJ	ENSMUSG00215039657	pseudogene	Chr13:58821563-58833250 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040803	pseudogene	Chr13:59315791-59327613 (-)
CBA/J	ENSMUSG00210039881	pseudogene	Chr13:59018661-59030346 (+)
DBA/2J	ENSMUSG00185017520	pseudogene	Chr13:59867277-59878976 (+)
FVB/NJ	ENSMUSG00205046781	pseudogene	Chr13:58026031-58037711 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230036246	pseudogene	Chr13:69221516-69233199 (+)
NOD/ShiLtJ	ENSMUSG00190036259	pseudogene	Chr13:58787156-58798820 (+)
NZO/HlLtJ	ENSMUSG00225047643	pseudogene	Chr13:62918540-62930225 (+)
PWK/PhJ	ENSLUMG00010024358	pseudogene	Chr13:58413901-58425640 (-)
SPRET/EiJ	ENSMSPG00010043719	pseudogene	Chr13:58553991-58567095 (-)
WSB/EiJ	ENSIUOG00005024176	pseudogene	Chr13:60832359-60844243 (+)

Homology

• Gene Tree
  Gm3333
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm3333
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  30 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000113081 (Evidence)
• NCBI Gene
  100041430

Representative Sequences			Length	Strain/Species
genomic	100041430	NCBI Gene Model | MGI Sequence Detail	1495	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69