Gm3325 Gene Detail

Summary

• Symbol
  Gm3325
• Name
  predicted gene 3325
• Synonyms
  AU016916

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:3781503
  NCBI Gene: 100041420
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:62196662-62198023 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 32.74 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  79 from dbSNP Build 142
• Strain Annotations
  24

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781503	protein coding gene	Chr13:62163502-62201754 (+)
129S1/SvImJ	ENSMUSG00200017308	pseudogene	Chr13:58878217-58927518 (-)
A/J	ENSMUSG00195047247	pseudogene	Chr13:58441207-58476656 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180018894	pseudogene	Chr13:58678167-58723958 (+)
C3H/HeJ	ENSMUSG00175035138	protein coding gene	Chr13:58571162-58609761 (+)
C3H/HeJ	ENSMUSG00175045515	pseudogene	Chr13:58571110-58606559 (+)
C57BL/6NJ	ENSMUSG00215040304	pseudogene	Chr13:58573517-58608966 (+)
C57BL/6NJ	ENSMUSG00215037522	protein coding gene	Chr13:58573569-58612168 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041930	pseudogene	Chr13:58991436-59035847 (+)
CAST/EiJ	ENSTCUG00005041902	pseudogene	Chr13:58757326-58795587 (+)
CBA/J	ENSMUSG00210044704	pseudogene	Chr13:58770623-58806074 (+)
CBA/J	ENSMUSG00210031160	protein coding gene	Chr13:58770675-58809276 (+)
DBA/2J	ENSMUSG00185015516	protein coding gene	Chr13:59619295-59657898 (+)
DBA/2J	ENSMUSG00185018768	pseudogene	Chr13:59619243-59654696 (+)
FVB/NJ	ENSMUSG00205046621	pseudogene	Chr13:58108362-58140746 (-)
JF1/MsJ	ENSUMUG00000038225	pseudogene	Chr13:59187275-59226140 (+)
LP/J	ENSMUSG00230029047	protein coding gene	Chr13:68991199-69135004 (+)
LP/J	ENSMUSG00230036432	pseudogene	Chr13:68991147-69026623 (+)
NOD/ShiLtJ	ENSMUSG00190035839	pseudogene	Chr13:58556848-58592293 (+)
NZO/HlLtJ	ENSMUSG00225047889	pseudogene	Chr13:62670521-62705970 (+)
NZO/HlLtJ	ENSMUSG00225046220	protein coding gene	Chr13:62670573-62709168 (+)
PWK/PhJ	ENSLUMG00010024797	pseudogene	Chr13:58005781-58044733 (+)
SPRET/EiJ	ENSMSPG00010044382	pseudogene	Chr13:58203820-58246253 (+)
WSB/EiJ	ENSIUOG00005023540	pseudogene	Chr13:60700383-60744112 (+)

Homology

• Gene Tree
  Gm3325
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm3325
• Find Mice (IMSR)
  4 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  37
• RefSeq
  8

• Ensembl
  ENSMUSG00000113836 (Evidence)
• NCBI Gene
  100041420

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113836	Ensembl Gene Model | MGI Sequence Detail	1362	C57BL/6J
transcript	ENSMUST00000221814	Ensembl | MGI Sequence Detail	1362	Not Applicable
polypeptide	NP_001365438	RefSeq | MGI Sequence Detail	136	C57BL/6

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 1

Other
Accession IDs

MGI:2145339

References

• Summaries
  All 11

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49