Gm3283 Pseudogene Detail

Summary

• Symbol
  Gm3283
• Name
  predicted gene 3283

• Feature Type
  pseudogene
• IDs
  MGI:3781461
  NCBI Gene: 100041349
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:57386608-57387957 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 30.92 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  168 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781461	pseudogene	Chr5:57386575-57387988 (+)
129S1/SvImJ	ENSMUSG00200000080	pseudogene	Chr5:52938764-52940113 (+)
A/J	ENSMUSG00195000527	pseudogene	Chr5:52331653-52333002 (+)
AKR/J	ENSMUSG00220007196	pseudogene	Chr5:52397295-52398644 (+)
BALB/cJ	ENSMUSG00180006625	pseudogene	Chr5:52089805-52091154 (+)
C3H/HeJ	ENSMUSG00175001725	pseudogene	Chr5:54132189-54133538 (+)
C57BL/6NJ	ENSMUSG00215002829	pseudogene	Chr5:52889078-52890427 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011606	pseudogene	Chr5:50999025-51000352 (+)
CAST/EiJ	ENSTCUG00005000703	pseudogene	Chr5:52236793-52238148 (+)
CBA/J	ENSMUSG00210000333	pseudogene	Chr5:53090786-53092135 (+)
DBA/2J	ENSMUSG00185000138	pseudogene	Chr5:54953165-54954514 (+)
FVB/NJ	ENSMUSG00205011732	pseudogene	Chr5:51942459-51943808 (+)
JF1/MsJ	ENSUMUG00000001166	pseudogene	Chr5:59529887-59531242 (+)
LP/J	ENSMUSG00230010488	pseudogene	Chr5:59614626-59615975 (+)
NOD/ShiLtJ	ENSMUSG00190000724	pseudogene	Chr5:52022706-52024055 (+)
NZO/HlLtJ	ENSMUSG00225002715	pseudogene	Chr5:64743720-64745069 (+)
PWK/PhJ	ENSLUMG00010004514	pseudogene	Chr5:52137832-52139187 (+)
SPRET/EiJ	ENSMSPG00010004128	pseudogene	Chr5:53743683-53745028 (+)
WSB/EiJ	ENSIUOG00005000142	pseudogene	Chr5:54979838-54981182 (+)

Homology

• Gene Tree
  Gm3283
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm3283
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000104739 (Evidence)
• NCBI Gene
  100041349

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104739	Ensembl Gene Model | MGI Sequence Detail	1350	C57BL/6J
transcript	ENSMUST00000199319	Ensembl | MGI Sequence Detail	1350	Not Applicable

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17